RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 HIST1H2BBP33778 126 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST1H2BDP58876 126 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST1H2BCP62807 126 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 RTP5Q14D33 572 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST2H2BEQ16778 126 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 NMSQ5H8A3 153 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 MKXQ8IYA7 352 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST1H2BHQ93079 126 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 C10orf35Q96D05 121 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 LOXL4Q96JB6 756 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 TAAR9Q96RI9 348 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST1H2BNQ99877 126 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST1H2BMQ99879 126 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 SH2D2AQ9NP31 389 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 UBE2L5PA0A1B0GUS4 154 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 GJE1A6NN92 205 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 IFNL4K9M1U5 179 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 SLC34A2O95436 690 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 ALKBH6Q3KRA9 238 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 ZNF295-AS1Q8N0V1 137 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 OR10J5Q8NHC4 309 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 S100PBPQ96BU1 408 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 RPUSD4Q96CM3 377 aaKnown RBP11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST1H2AAQ96QV6 131 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 PRSS50Q9UI38 385 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 PGA5P0DJD9 388 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 VDAC1P21796 283 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 CD200P41217 278 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 NUFIP2Q7Z417 695 aaKnown RBP11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 LILRB2Q8N423 598 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 CLDND2Q8NHS1 167 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 FRZBQ92765 325 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 SLC25A31Q9H0C2 315 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 FZR1Q9UM11 496 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 TRAV24A0A0B4J272 114 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 IGKV1-39P01597 117 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 IGKV1D-39P04432 117 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 CELA3BP08861 270 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 EGR1P18146 543 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 S100A2P29034 98 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 PMP22Q01453 160 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 ZNF726P1Q15940 193 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 ZNF787Q6DD87 383 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 FIP1L1Q6UN15 594 aaKnown RBP11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 ASCL4Q6XD76 172 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 STX12Q86Y82 276 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 OR51M1Q9H341 326 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 C11orf1Q9H5F2 150 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 TINAGQ9UJW2 476 aa11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 HEATR1Q9H583 2144 aaKnown RBP11.16□□□□□ -0.62
SLC48A1-201ENST00000442218 CD300LBA8K4G0 201 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 KRASP01116 189 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 GRPP07492 148 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 F2RP25116 425 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 RAB5CP51148 216 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 UCP2P55851 309 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 ZNF816Q0VGE8 651 aaPredicted RBP11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 ADIRFQ15847 76 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 PCSK4Q6UW60 755 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 BTNL3Q6UXE8 466 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 LRP11Q86VZ4 500 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 ZNF610Q8N9Z0 462 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 M1APQ8TC57 530 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 MRPL30Q8TCC3 161 aaKnown RBP11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 ADGRG7Q96K78 797 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 SLC25A22Q9H936 323 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 UFSP2Q9NUQ7 469 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 CEP295Q9C0D2 2601 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 RBMXL2O75526 392 aaKnown RBP11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 IFNA5P01569 189 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 TRGC1P0CF51 173 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 FKBP2P26885 142 aaKnown RBP11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 PCBD1P61457 104 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 ID3Q02535 119 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 DCAF12Q5T6F0 453 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 TMEM56Q96MV1 263 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 SPIN2AQ99865 258 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 SPIN2BQ9BPZ2 258 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 SF3B5Q9BWJ5 86 aaKnown RBP11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 KIAA1456Q9P272 454 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 TMEM56-RWDD3S4R434 201 aa11.15□□□□□ -0.62
SLC48A1-201ENST00000442218 B4E171 279 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 C9orf172C9J069 976 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 NAPSAO96009 420 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 TSPAN7P41732 249 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 FGF12P61328 243 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 SRSF6Q13247 344 aaKnown RBP11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 PRSS8Q16651 343 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 COMMD1Q8N668 190 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 CCDC54Q8NEL0 328 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 TVP23CQ96ET8 276 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 ATP5SQ99766 215 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 REPIN1Q9BWE0 567 aaKnown RBP11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 C1QTNF5Q9BXJ0 243 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 DEFB127Q9H1M4 99 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 PSENENQ9NZ42 101 aa11.14□□□□□ -0.63
SLC48A1-201ENST00000442218 TRAPPC2LQ9UL33 140 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms