RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 OR1D5P58170 312 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 CD276Q5ZPR3 534 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 TMEM179BQ7Z7N9 219 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 TMEM86AQ8N2M4 240 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 NAT16Q8N8M0 369 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 OR2T12Q8NG77 320 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 GPER1Q99527 375 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 NAA38Q9BRA0 125 aaKnown RBP8.89□□□□□ -0.99
SYNE2-206ENST00000441438 ZFAND3Q9H8U3 227 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 SIT1Q9Y3P8 196 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 NYNRINQ9P2P1 1898 aaKnown RBP8.89□□□□□ -0.99
SYNE2-206ENST00000441438 LINC01553A4QN01 128 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 GAGE12HA6NDE8 117 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 WISP1O95388 367 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 MOSP00540 346 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 SRD5A1P18405 259 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 HSPE1P61604 102 aaKnown RBP8.89□□□□□ -0.99
SYNE2-206ENST00000441438 RPS28P62857 69 aaKnown RBP8.89□□□□□ -0.99
SYNE2-206ENST00000441438 SPSB3Q6PJ21 355 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 C19orf48Q6RUI8 117 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 HIST3H2BBQ8N257 126 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 C2orf15Q8WU43 125 aaKnown RBP8.89□□□□□ -0.99
SYNE2-206ENST00000441438 FBXL15Q9H469 300 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 M0R082 166 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 DBIP07108 87 aaKnown RBP8.89□□□□□ -0.99
SYNE2-206ENST00000441438 MYL12AP19105 171 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 CSRP1P21291 193 aaKnown RBP8.89□□□□□ -0.99
SYNE2-206ENST00000441438 HIST1H3AP68431 136 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 H3F3AP84243 136 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 HOXC5Q00444 222 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 SSX1Q16384 188 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 C10orf91Q5T1B1 145 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 C8orf86Q6ZUL3 223 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 HIST2H3AQ71DI3 136 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 OR2K2Q8NGT1 345 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 OR2T27Q8NH04 317 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 TBX15Q96SF7 602 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 S1PR3Q99500 378 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 SFXN1Q9H9B4 322 aa8.89□□□□□ -0.99
SYNE2-206ENST00000441438 SIRT4Q9Y6E7 314 aaPredicted RBP8.89□□□□□ -0.99
SYNE2-206ENST00000441438 KNL1Q8NG31 2342 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-206ENST00000441438 ZAR1LA6NP61 321 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 ANKRD36A6QL64 1941 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 ZNF724A8MTY0 619 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 J3QL48 77 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 CLDN11O75508 207 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 SNAPC5O75971 98 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 HBE1P02100 147 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 DEFB103AP81534 67 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 GINS1Q14691 196 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 KIAA0040Q15053 153 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 FBXL22Q6P050 247 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 ANKRD37Q7Z713 158 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 ZNF681Q96N22 645 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 MIEN1Q9BRT3 115 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 CES1P1Q9UKY3 287 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-206ENST00000441438 SPRY3O43610 288 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 FAM20BO75063 409 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 KBTBD11O94819 623 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 ORM2P19652 201 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 BLVRBP30043 206 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-206ENST00000441438 MEF2BQ02080 365 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-206ENST00000441438 PNRC1Q12796 327 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-206ENST00000441438 TAF10Q12962 218 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 PSG7Q13046 419 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 GTF2H5Q6ZYL4 71 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 PGBD5Q8N414 524 aa8.88□□□□□ -0.99
SYNE2-206ENST00000441438 ZMYND19Q96E35 227 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-206ENST00000441438 PCYT1BQ9Y5K3 369 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-206ENST00000441438 FAM220BPB1ANY3 271 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 CFDP00746 253 aaPredicted RBP8.87□□□□□ -0.99
SYNE2-206ENST00000441438 GASTP01350 101 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 ZNF19P17023 458 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 GADD45AP24522 165 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 TGFBR1P36897 503 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 RPS24P62847 133 aaKnown RBP8.87□□□□□ -0.99
SYNE2-206ENST00000441438 MYBPHQ13203 477 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 MS4A13Q5J8X5 152 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 ANKRD34AQ69YU3 496 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 OR52E2Q8NGJ4 325 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 TMEM170AQ8WVE7 144 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 HES4Q9HCC6 221 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 FAM236DA0A1B0GTK5 79 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 UBE2QL1A1L167 161 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 SH2D1BO14796 132 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 FAM236CP0DP71 79 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 EVI2AP22794 236 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 MTPNP58546 118 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 RPL27P61353 136 aaKnown RBP8.87□□□□□ -0.99
SYNE2-206ENST00000441438 RBM39Q14498 530 aaKnown RBP8.87□□□□□ -0.99
SYNE2-206ENST00000441438 TEX36Q5VZQ5 186 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 TMED6Q8WW62 240 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 OR5P3Q8WZ94 311 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 DERL1Q9BUN8 251 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 OR2D2Q9H210 308 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 RNF121Q9H920 327 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 DENND4CQ5VZ89 1909 aa8.87□□□□□ -0.99
SYNE2-206ENST00000441438 DOCK6Q96HP0 2047 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms