RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 TMEM11P17152 192 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 IL3RAP26951 378 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 PSMB9P28065 219 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 OR10A3P58181 314 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 ZNF816Q0VGE8 651 aaPredicted RBP10.96□□□□□ -0.65
LTBR-202ENST00000440421 GNMTQ14749 295 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 C2orf68Q2NKX9 166 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 C9orf152Q5JTZ5 239 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 HES5Q5TA89 166 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 OR2W3Q7Z3T1 314 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 THNSL2Q86YJ6 484 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 LINC00311Q8N616 119 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 C8orf31Q8N9H6 132 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 ZNF439Q8NDP4 499 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 OR52L2PQ8NGH6 319 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 SETD6Q8TBK2 473 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 FAM3DQ96BQ1 224 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 CHMP1AQ9HD42 196 aaPredicted RBP10.96□□□□□ -0.65
LTBR-202ENST00000440421 OR2S2Q9NQN1 319 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 MBNL3Q9NUK0 354 aaKnown RBP10.96□□□□□ -0.65
LTBR-202ENST00000440421 PLEKHJ1Q9NW61 149 aa10.96□□□□□ -0.65
LTBR-202ENST00000440421 PKD1L1Q8TDX9 2849 aa10.96□□□□□ -0.66
LTBR-202ENST00000440421 MGAM2Q2M2H8 2515 aa10.96□□□□□ -0.66
LTBR-202ENST00000440421 SHISA3A0PJX4 238 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 AMY1AP04745 511 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 AMY2AP04746 511 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 MYL9P24844 172 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 ZNF134P52741 427 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 C2orf76Q3KRA6 126 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 TMEM30BQ3MIR4 351 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 CT45A1Q5HYN5 189 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 UBE2UQ5VVX9 321 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 CT45A3Q8NHU0 189 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 WNT10AQ9GZT5 417 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 MOB4Q9Y3A3 225 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 LRRC42Q9Y546 428 aa10.95□□□□□ -0.66
LTBR-202ENST00000440421 TRAV1-2A0A0B4J238 106 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 TRDV1A0A1B0GX56 115 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 M0QZK8 103 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 PDCD5O14737 125 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 PPP1CCP36873 323 aaKnown RBP10.94□□□□□ -0.66
LTBR-202ENST00000440421 VEGFCP49767 419 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 PSMD7P51665 324 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 PLA2G7Q13093 441 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 NSUN5P1Q3KNT7 163 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 Q3ZCU0 254 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 MORN2Q502X0 79 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 C22orf42Q6IC83 251 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 CD200R1LQ6Q8B3 271 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 Q6ZPA2 131 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 SLC25A48Q6ZT89 311 aaKnown RBP10.94□□□□□ -0.66
LTBR-202ENST00000440421 RTN4IP1Q8WWV3 396 aaPredicted RBP10.94□□□□□ -0.66
LTBR-202ENST00000440421 ST6GALNAC6Q969X2 333 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 GALMQ96C23 342 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 RBMXL1Q96E39 390 aaKnown RBP10.94□□□□□ -0.66
LTBR-202ENST00000440421 CITED2Q99967 270 aaPredicted RBP10.94□□□□□ -0.66
LTBR-202ENST00000440421 HDHD3Q9BSH5 251 aaPredicted RBP10.94□□□□□ -0.66
LTBR-202ENST00000440421 YTHDF1Q9BYJ9 559 aaKnown RBP10.94□□□□□ -0.66
LTBR-202ENST00000440421 STEAP1Q9UHE8 339 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 AK3Q9UIJ7 227 aa10.94□□□□□ -0.66
LTBR-202ENST00000440421 TMEM272A0A1B0GTI8 110 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 SMIM30A4D0T7 59 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 NAPSAO96009 420 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 HMGN3Q15651 99 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 CENPVQ7Z7K6 275 aaPredicted RBP10.93□□□□□ -0.66
LTBR-202ENST00000440421 ZNF554Q86TJ5 538 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 TGIF2LXQ8IUE1 241 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 FAM89BQ8N5H3 189 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 OR5AU1Q8NGC0 362 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 WIPF2Q8TF74 440 aaPredicted RBP10.93□□□□□ -0.66
LTBR-202ENST00000440421 IL1F10Q8WWZ1 152 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 FCGR1BQ92637 280 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 ABRACLQ9P1F3 81 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 JPT1Q9UK76 154 aa10.93□□□□□ -0.66
LTBR-202ENST00000440421 A0A0B4J203 849 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 IFITM5A6NNB3 132 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 FOXI3A8MTJ6 420 aaPredicted RBP10.92□□□□□ -0.66
LTBR-202ENST00000440421 ZNF736B4DX44 427 aaPredicted RBP10.92□□□□□ -0.66
LTBR-202ENST00000440421 LDLRAD4O15165 306 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 RAB3BP20337 219 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 TMEM50BP56557 158 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 HTD2P86397 168 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 ZNF773Q6PK81 442 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 C5orf56Q8N8D9 126 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 ARHGAP5-AS1Q96IT6 56 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 EAF1Q96JC9 268 aaPredicted RBP10.92□□□□□ -0.66
LTBR-202ENST00000440421 ABHD14AQ9BUJ0 271 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 PECRQ9BY49 303 aa10.92□□□□□ -0.66
LTBR-202ENST00000440421 A0A1W2PRX2 142 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 NCBP2LA6PVI3 153 aaKnown RBP10.91□□□□□ -0.66
LTBR-202ENST00000440421 YPEL1O60688 119 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 RGS11O94810 467 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 GALP22466 123 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 RANBP1P43487 201 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 ZNF137PP52743 207 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 PLAC9Q5JTB6 97 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 STEAP3Q658P3 488 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 ZNF880Q6PDB4 577 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 C10orf99Q6UWK7 81 aa10.91□□□□□ -0.66
LTBR-202ENST00000440421 NR2C2APQ86WQ0 139 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms