RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 SOCS1O15524 211 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 GAPDHP04406 335 aaKnown RBP19.19■□□□□ 0.66
CPNE1-217ENST00000439669 OR10A3P58181 314 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 ZNF816Q0VGE8 651 aaPredicted RBP19.19■□□□□ 0.66
CPNE1-217ENST00000439669 C2orf68Q2NKX9 166 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 ABCA11PQ4W5N1 156 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 HIST2H2BDQ6DRA6 164 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 C22orf42Q6IC83 251 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 ZNF773Q6PK81 442 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 MOB3BQ86TA1 216 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 ZNF554Q86TJ5 538 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 THNSL2Q86YJ6 484 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 SETD6Q8TBK2 473 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 CFHR4Q92496 578 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 STEAP1Q9UHE8 339 aa19.19■□□□□ 0.66
CPNE1-217ENST00000439669 SHISA3A0PJX4 238 aa19.18■□□□□ 0.66
CPNE1-217ENST00000439669 FAM90A9PA6NNJ1 464 aa19.18■□□□□ 0.66
CPNE1-217ENST00000439669 C2orf76Q3KRA6 126 aa19.18■□□□□ 0.66
CPNE1-217ENST00000439669 SLC25A48Q6ZT89 311 aaKnown RBP19.18■□□□□ 0.66
CPNE1-217ENST00000439669 C5orf24Q7Z6I8 188 aa19.18■□□□□ 0.66
CPNE1-217ENST00000439669 ZNF439Q8NDP4 499 aa19.18■□□□□ 0.66
CPNE1-217ENST00000439669 OR52L2PQ8NGH6 319 aa19.18■□□□□ 0.66
CPNE1-217ENST00000439669 MOB4Q9Y3A3 225 aa19.18■□□□□ 0.66
CPNE1-217ENST00000439669 TET2Q6N021 2002 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-217ENST00000439669 IGHV1-3A0A0C4DH29 117 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 SH2D7A6NKC9 451 aaPredicted RBP19.17■□□□□ 0.66
CPNE1-217ENST00000439669 M0QZK8 103 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 FBXO24O75426 580 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 TSPAN15O95858 294 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 IGKV1D-33P01593 117 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 IGKV1-33P01594 117 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 TMEM11P17152 192 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 GALP22466 123 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 VEGFCP49767 419 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 HNF4GQ14541 408 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 GNMTQ14749 295 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 GALMQ96C23 342 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 MMP27Q9H306 513 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 ABRACLQ9P1F3 81 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 JPT1Q9UK76 154 aa19.17■□□□□ 0.66
CPNE1-217ENST00000439669 NBEAL1Q6ZS30 2694 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 IGHV3-72A0A0B4J1Y9 119 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 LPLP06858 475 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 CSF1P09603 554 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 RAB3BP20337 219 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 HMGN3Q15651 99 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 CT45A1Q5HYN5 189 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 C9orf152Q5JTZ5 239 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 FAM89BQ8N5H3 189 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 CT45A3Q8NHU0 189 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 AK3Q9UIJ7 227 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 MGAM2Q2M2H8 2515 aa19.16■□□□□ 0.66
CPNE1-217ENST00000439669 TMEM272A0A1B0GTI8 110 aa19.15■□□□□ 0.66
CPNE1-217ENST00000439669 NAPSAO96009 420 aa19.15■□□□□ 0.66
CPNE1-217ENST00000439669 PPP1CCP36873 323 aaKnown RBP19.15■□□□□ 0.66
CPNE1-217ENST00000439669 ZNF134P52741 427 aa19.15■□□□□ 0.66
CPNE1-217ENST00000439669 MORN2Q502X0 79 aa19.15■□□□□ 0.66
CPNE1-217ENST00000439669 MOB1BQ7L9L4 216 aa19.15■□□□□ 0.66
CPNE1-217ENST00000439669 OR56B1Q8NGI3 324 aa19.15■□□□□ 0.66
CPNE1-217ENST00000439669 RTN4IP1Q8WWV3 396 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-217ENST00000439669 IL1F10Q8WWZ1 152 aa19.15■□□□□ 0.66
CPNE1-217ENST00000439669 HDHD3Q9BSH5 251 aaPredicted RBP19.15■□□□□ 0.66
CPNE1-217ENST00000439669 WNT10AQ9GZT5 417 aa19.15■□□□□ 0.66
CPNE1-217ENST00000439669 IFITM5A6NNB3 132 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 LDLRAD4O15165 306 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 AMY1AP04745 511 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 AMY2AP04746 511 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 HTD2P86397 168 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 TGIF2LXQ8IUE1 241 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 LYG1Q8N1E2 194 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 ST6GALNAC6Q969X2 333 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 ARHGAP5-AS1Q96IT6 56 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 ABHD14AQ9BUJ0 271 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 RIMS4Q9H426 269 aaPredicted RBP19.14■□□□□ 0.65
CPNE1-217ENST00000439669 RAB22AQ9UL26 194 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 HSF4Q9ULV5 492 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 STUB1Q9UNE7 303 aa19.14■□□□□ 0.65
CPNE1-217ENST00000439669 SMIM30A4D0T7 59 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 FOXI3A8MTJ6 420 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-217ENST00000439669 TXNL1O43396 289 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 RGS11O94810 467 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 CD28P10747 220 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 ZNF137PP52743 207 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 PLA2G7Q13093 441 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 KCTD21Q4G0X4 260 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 STEAP3Q658P3 488 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 Q6ZPA2 131 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 FAM110DQ8TAY7 271 aaPredicted RBP19.13■□□□□ 0.65
CPNE1-217ENST00000439669 PECRQ9BY49 303 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 C12orf4Q9NQ89 552 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 TXNL4BQ9NX01 149 aaKnown RBP19.13■□□□□ 0.65
CPNE1-217ENST00000439669 SSR3Q9UNL2 185 aa19.13■□□□□ 0.65
CPNE1-217ENST00000439669 WNK1Q9H4A3 2382 aa19.12■□□□□ 0.65
CPNE1-217ENST00000439669 YPEL1O60688 119 aa19.12■□□□□ 0.65
CPNE1-217ENST00000439669 FGF9P31371 208 aaPredicted RBP19.12■□□□□ 0.65
CPNE1-217ENST00000439669 TMEM50BP56557 158 aa19.12■□□□□ 0.65
CPNE1-217ENST00000439669 NEDD8Q15843 81 aa19.12■□□□□ 0.65
CPNE1-217ENST00000439669 ZNF880Q6PDB4 577 aa19.12■□□□□ 0.65
CPNE1-217ENST00000439669 IZUMO1Q8IYV9 350 aa19.12■□□□□ 0.65
CPNE1-217ENST00000439669 YPEL2Q96QA6 119 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms