RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 C12orf4Q9NQ89 552 aa15.71■□□□□ 0.11
SEMA3B-206ENST00000439487 OR2S2Q9NQN1 319 aa15.71■□□□□ 0.11
SEMA3B-206ENST00000439487 ABRACLQ9P1F3 81 aa15.71■□□□□ 0.11
SEMA3B-206ENST00000439487 ELF5Q9UKW6 265 aaPredicted RBP15.71■□□□□ 0.11
SEMA3B-206ENST00000439487 SPATA2Q9UM82 520 aa15.71■□□□□ 0.11
SEMA3B-206ENST00000439487 TMEM89A2RUT3 159 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 VGLL3A8MV65 326 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 SLC31A2O15432 143 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 TMEM127O75204 238 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 HKR1P10072 659 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 CEACAM3P40198 252 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 MRPS15P82914 257 aaKnown RBP15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 GNMTQ14749 295 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 TMEM30BQ3MIR4 351 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 CDNFQ49AH0 187 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 OR10X1Q8NGY0 326 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 GALMQ96C23 342 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 ABCB10Q9NRK6 738 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 AMMECR1Q9Y4X0 333 aaPredicted RBP15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 TENM1Q9UKZ4 2725 aa15.7■□□□□ 0.1
SEMA3B-206ENST00000439487 CRYBA1P05813 215 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 PPP1CCP36873 323 aaKnown RBP15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 RPL5P46777 297 aaKnown RBP15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 HLA-DRB3P79483 266 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 HTD2P86397 168 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 ARFRP1Q13795 201 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 DIAPH2-AS1Q14236 149 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 MORN2Q502X0 79 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 CLVS1Q8IUQ0 354 aaPredicted RBP15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 LINC00311Q8N616 119 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 ZNF439Q8NDP4 499 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 IL1F10Q8WWZ1 152 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 JPT1Q9UK76 154 aa15.69■□□□□ 0.1
SEMA3B-206ENST00000439487 SERPINE3A8MV23 424 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 SCTP09683 121 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 ZNF134P52741 427 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 MADCAM1Q13477 382 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 Q3ZCU0 254 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 CT45A1Q5HYN5 189 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 C8orf31Q8N9H6 132 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 CT45A3Q8NHU0 189 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 TOMM40LQ969M1 308 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 RPEQ96AT9 228 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 OCSTAMPQ9BR26 566 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 DCSTAMPQ9H295 470 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 C1RLQ9NZP8 487 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 MGAT4AQ9UM21 535 aa15.68■□□□□ 0.1
SEMA3B-206ENST00000439487 SCGNO76038 276 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 FCGR3AP08637 254 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 DYNLT3P51808 116 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 RELBQ01201 579 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 ARL6IP1Q15041 203 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 ZNF260Q3ZCT1 412 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 CCBE1Q6UXH8 406 aaPredicted RBP15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 SLC25A48Q6ZT89 311 aaKnown RBP15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 IZUMO1Q8IYV9 350 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 MAFIPQ8WZ33 124 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 PHF21AQ96BD5 680 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 ZNF230Q9UIE0 474 aaPredicted RBP15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 TCF19Q9Y242 345 aa15.67■□□□□ 0.1
SEMA3B-206ENST00000439487 TRAV18A0A075B6X5 111 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 TMEM235A6NFC5 223 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 POM121CA8CG34 1229 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 OOSP1A8MZH6 123 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 TRDCB7Z8K6 153 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 YPEL1O60688 119 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 CD24P25063 80 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 TALDO1P37837 337 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 HACD4Q5VWC8 232 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 DHRS7BQ6IAN0 325 aaPredicted RBP15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 TMEM219Q86XT9 240 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 SPATA3Q8NHX4 192 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 YPEL2Q96QA6 119 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 SCOCQ9UIL1 159 aa15.66■□□□□ 0.1
SEMA3B-206ENST00000439487 A6NDX4 124 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 RGS11O94810 467 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 GSTP1P09211 210 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 BRS3P32247 399 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 MNDAP41218 407 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 REG1BP48304 166 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 RORCP51449 518 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 RPL15P61313 204 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 UBE2NLQ5JXB2 153 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 STEAP3Q658P3 488 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 CCDC144NLQ6NUI1 221 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 SAMD12Q8N8I0 201 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 DTX3Q8N9I9 347 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 NUDCD2Q8WVJ2 157 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 KCTD12Q96CX2 325 aaKnown RBP15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 ABCG5Q9H222 651 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 DIABLOQ9NR28 239 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 OR1A1Q9P1Q5 309 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 COMMD3Q9UBI1 195 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 SLC23A1Q9UHI7 598 aa15.65■□□□□ 0.1
SEMA3B-206ENST00000439487 IGKV1-6A0A0C4DH72 117 aa15.64■□□□□ 0.09
SEMA3B-206ENST00000439487 HSD17B6O14756 317 aa15.64■□□□□ 0.09
SEMA3B-206ENST00000439487 CHST1O43916 411 aa15.64■□□□□ 0.09
SEMA3B-206ENST00000439487 GSTT2P0CG29 244 aa15.64■□□□□ 0.09
SEMA3B-206ENST00000439487 GSTT2BP0CG30 244 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms