RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 NPSP0C0P6 89 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 SELEP16581 610 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 MAGEA5P43359 124 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 GNB2P62879 340 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 PAX5Q02548 391 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 TMEM187Q14656 261 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 TMEM164Q5U3C3 297 aa8.54□□□□□ -1.04
CDC42SE1-202ENST00000439374 ARGFXA6NJG6 315 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 GJE1A6NN92 205 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 VAMP5O95183 116 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 IL11RAQ14626 422 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 CNN3Q15417 329 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 CXorf67Q86X51 503 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZNF611Q8N823 705 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR51G1Q8NGK1 321 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 TAAR9Q96RI9 348 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 PNRC2Q9NPJ4 139 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 DEPPQ9NTK1 212 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 LRRC3CA6NJW4 275 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 CER1O95813 267 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 NGFP01138 241 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 GALR1P47211 349 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 TLE4Q04727 773 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 C6orf15Q6UXA7 325 aaPredicted RBP8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 OSR2Q8N2R0 312 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 OR2V1Q8NHB1 315 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 BOD1Q96IK1 185 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 HS3ST6Q96QI5 342 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 WNK2Q9Y3S1 2297 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 PROB1E7EW31 1015 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 K7N7A8 449 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 TMEM127O75204 238 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 PPYP01298 95 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 SERPINA7P05543 415 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 GZMBP10144 247 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 CEACAM1P13688 526 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 SRSF4Q08170 494 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 HES3Q5TGS1 186 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 CARFQ8N187 725 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 TMEM256Q8N2U0 113 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 ZIC4Q8N9L1 334 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 VN1R17PQ8TDU5 208 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 CACNG5Q9UF02 275 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 V9GYS6 101 aa8.53□□□□□ -1.04
CDC42SE1-202ENST00000439374 SPTBN1Q01082 2364 aaKnown RBP8.52□□□□□ -1.04
CDC42SE1-202ENST00000439374 IGKV1D-13A0A0B4J2D9 117 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 TOX3O15405 576 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 DFFBO76075 338 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 TK1P04183 234 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 IGKV1-13P0DP09 117 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 RAC3P60763 192 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 PLP2Q04941 152 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 FAM189A2Q15884 450 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 SPSB3Q6PJ21 355 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 PP6455Q8WZ26 134 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 IMMP1LQ96LU5 166 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 TBX15Q96SF7 602 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 SAMD10Q9BYL1 202 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 STRAPQ9Y3F4 350 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 LOC390937A0A1W2PQ73 354 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 MAP1LC3B2A6NCE7 125 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZNF732B4DXR9 585 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 MPPED1O15442 326 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 KRASP01116 189 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 GAPDHP04406 335 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 GLIPR1P48060 266 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 KRTDAPP60985 99 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 SLC10A1Q14973 349 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 TDRG1Q3Y452 100 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 TMEM41BQ5BJD5 291 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 TEX38Q6PEX7 206 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 ZNF818PQ6ZRF7 136 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 LHFPL1Q86WI0 220 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 CNEP1R1Q8N9A8 125 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR10A7Q8NGE5 316 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR5D13Q8NGL4 314 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 CPT1CQ8TCG5 803 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 OIT3Q8WWZ8 545 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 ATP5SQ99766 215 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 MAP1LC3BQ9GZQ8 125 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 EGLN1Q9GZT9 426 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 FZR1Q9UM11 496 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 IGKV1-27A0A075B6S5 117 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 CD300LBA8K4G0 201 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 SERPINE3A8MV23 424 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 GRPP07492 148 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 COX5BP10606 129 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 PAX6P26367 422 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 RSPO1Q2MKA7 263 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 KIAA1644Q3SXP7 199 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 HIKESHIQ53FT3 197 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 FAM53AQ6NSI3 398 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 DPPA3Q6W0C5 159 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 SSX7Q7RTT5 188 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 OR10V1Q8NGI7 309 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 DTD1Q8TEA8 209 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 SNHG12Q9BXW3 62 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 STRADBQ9C0K7 418 aa8.52□□□□□ -1.05
CDC42SE1-202ENST00000439374 PARD6AQ9NPB6 346 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 285.7 ms