RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 SP5Q6BEB4 398 aaPredicted RBP10.41□□□□□ -0.74
NEK1-201ENST00000439128 MEGF10Q96KG7 1140 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 TET1Q8NFU7 2136 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 OR4C45A6NMZ5 311 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 UMAD1C9J7I0 102 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 OGG1O15527 345 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 SLC25A17O43808 307 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 SRSF6Q13247 344 aaKnown RBP10.41□□□□□ -0.74
NEK1-201ENST00000439128 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 CRIPAKQ8N1N5 446 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 SCARB1Q8WTV0 552 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 FAM103A1Q9BTL3 118 aaKnown RBP10.41□□□□□ -0.74
NEK1-201ENST00000439128 PARD6AQ9NPB6 346 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 PPP5D1E7EU14 171 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 IZUMO4Q1ZYL8 232 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 PRSS53Q2L4Q9 553 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 C11orf42Q8N5U0 333 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 CACNA1CQ13936 2221 aa10.41□□□□□ -0.74
NEK1-201ENST00000439128 CTSDP07339 412 aaPredicted RBP10.4□□□□□ -0.74
NEK1-201ENST00000439128 COX5BP10606 129 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 RAB5AP20339 215 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 PPOXP50336 477 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 SCAND1P57086 179 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 OR2T10Q8NGZ9 312 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 C14orf79Q96F83 325 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 FAM210AQ96ND0 272 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 RHOFQ9HBH0 211 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 MTFP1Q9UDX5 166 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 CYB5R1Q9UHQ9 305 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 IGHV2OR16-5A0A0B4J2B6 119 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 SYNGR2O43760 224 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 THBDP07204 575 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 POLR2GP62487 172 aaKnown RBP eCLIP10.4□□□□□ -0.74
NEK1-201ENST00000439128 PJVKQ0ZLH3 352 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 ZNF738Q8NE65 137 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 TMEM45BQ96B21 275 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 PRSS27Q9BQR3 290 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 TECRQ9NZ01 308 aaKnown RBP10.4□□□□□ -0.74
NEK1-201ENST00000439128 PRR13Q9NZ81 148 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 HIGD1AQ9Y241 93 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 SPTA1P02549 2419 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 HPRT1P00492 218 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 NPY1RP25929 384 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 ERVS71-1P61550 626 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 ATP6V1FQ16864 119 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 OR10G4Q8NGN3 311 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 OR10G9Q8NGN4 311 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 OR10G7Q8NGN6 311 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 WDR89Q96FK6 387 aaPredicted RBP10.4□□□□□ -0.74
NEK1-201ENST00000439128 GPA33Q99795 319 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 IGKV3D-15A0A087WSY6 115 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 PROB1E7EW31 1015 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 IGKV3-15P01624 115 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 RPL35P42766 123 aaKnown RBP10.4□□□□□ -0.74
NEK1-201ENST00000439128 NCCRP1Q6ZVX7 275 aaPredicted RBP10.4□□□□□ -0.74
NEK1-201ENST00000439128 LILRB4Q8NHJ6 448 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 LINC00470Q9BZP3 86 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 Q9N2K0 584 aa10.4□□□□□ -0.74
NEK1-201ENST00000439128 CGB1A6NKQ9 187 aa10.4□□□□□ -0.75
NEK1-201ENST00000439128 DHRS7CA6NNS2 312 aa10.4□□□□□ -0.75
NEK1-201ENST00000439128 GZMKP49863 264 aa10.4□□□□□ -0.75
NEK1-201ENST00000439128 GNG4P50150 75 aa10.4□□□□□ -0.75
NEK1-201ENST00000439128 FAM201AQ5SY85 155 aa10.4□□□□□ -0.75
NEK1-201ENST00000439128 MMD2Q8IY49 270 aa10.4□□□□□ -0.75
NEK1-201ENST00000439128 OR10J6PQ8NGY7 276 aa10.4□□□□□ -0.75
NEK1-201ENST00000439128 TMEM54Q969K7 222 aa10.4□□□□□ -0.75
NEK1-201ENST00000439128 KPTNQ9Y664 436 aa10.4□□□□□ -0.75
NEK1-201ENST00000439128 ABCA7Q8IZY2 2146 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 TPRP12270 2363 aaKnown RBP10.39□□□□□ -0.75
NEK1-201ENST00000439128 C9orf170A2RU37 121 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 KIR3DL2P43630 455 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 AMTP48728 403 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 KIAA0141Q14154 515 aaPredicted RBP10.39□□□□□ -0.75
NEK1-201ENST00000439128 C1orf162Q8NEQ5 155 aaPredicted RBP10.39□□□□□ -0.75
NEK1-201ENST00000439128 OR4P4Q8NGL7 312 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 WSB1Q9Y6I7 421 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 DNAJC13O75165 2243 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 VSIG8P0DPA2 414 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 CD37P11049 281 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 FGF9P31371 208 aaPredicted RBP10.39□□□□□ -0.75
NEK1-201ENST00000439128 NTNG2Q96CW9 530 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 SVILO95425 2214 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 ZIC3O60481 467 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 TRGV3P03979 118 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 GALP22466 123 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 CRYBB2P43320 205 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 VDAC2P45880 294 aaPredicted RBP10.39□□□□□ -0.75
NEK1-201ENST00000439128 FABP9Q0Z7S8 132 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 C10orf111Q8N326 155 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 C11orf44Q8N8P7 122 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 KCNAB3O43448 404 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 TUSC1Q2TAM9 212 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 FAM78BQ5VT40 261 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 FA2HQ7L5A8 372 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 CTHRC1Q96CG8 243 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 SCMH1Q96GD3 660 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 SLC2A8Q9NY64 477 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 KIF13BQ9NQT8 1826 aa10.39□□□□□ -0.75
NEK1-201ENST00000439128 SMIM18P0DKX4 95 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 DSCR9P59020 149 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms