RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PKD1L1Q8TDX9 2849 aa19.78■□□□□ 0.76
RAPGEF1-206ENST00000438647 SNRNP70P08621 437 aaKnown RBP19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 CLDN12P56749 244 aa19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 DIAPH2-AS1Q14236 149 aa19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 HES1Q14469 280 aa19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 C2orf68Q2NKX9 166 aa19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 SLC25A48Q6ZT89 311 aaKnown RBP19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 CFHR4Q92496 578 aa19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 CHMP1AQ9HD42 196 aaPredicted RBP19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 ABRACLQ9P1F3 81 aa19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 JPT1Q9UK76 154 aa19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 HSF4Q9ULV5 492 aa19.77■□□□□ 0.76
RAPGEF1-206ENST00000438647 A0A0A6YYD4 124 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 HTD2P86397 168 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 C2orf76Q3KRA6 126 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 HES5Q5TA89 166 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 MOB1BQ7L9L4 216 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 OR56B1Q8NGI3 324 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 OR10V1Q8NGI7 309 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 GALMQ96C23 342 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 MMP27Q9H306 513 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 MOB4Q9Y3A3 225 aa19.76■□□□□ 0.75
RAPGEF1-206ENST00000438647 IGHV1-3A0A0C4DH29 117 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 SOCS1O15524 211 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 TXNL1O43396 289 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 RGS11O94810 467 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 NAPSAO96009 420 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 RAB3BP20337 219 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 C22orf42Q6IC83 251 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 MOB3BQ86TA1 216 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 ZNF439Q8NDP4 499 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 CYYR1Q96J86 154 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 RAB22AQ9UL26 194 aa19.75■□□□□ 0.75
RAPGEF1-206ENST00000438647 IFITM5A6NNB3 132 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 TMEM11P17152 192 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 FGF9P31371 208 aaPredicted RBP19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 REG1BP48304 166 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 VEGFCP49767 419 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 ZNF137PP52743 207 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 HMGN3Q15651 99 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 KCTD21Q4G0X4 260 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 ABCA11PQ4W5N1 156 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 MORN2Q502X0 79 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 FAM53AQ6NSI3 398 aaPredicted RBP19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 Q6ZS46 218 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 RTN4IP1Q8WWV3 396 aaPredicted RBP19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 ST6GALNAC6Q969X2 333 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 WNT10AQ9GZT5 417 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 MGAT4AQ9UM21 535 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 STUB1Q9UNE7 303 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 CMYA5Q8N3K9 4069 aa19.74■□□□□ 0.75
RAPGEF1-206ENST00000438647 SHISA3A0PJX4 238 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 LDLRAD4O15165 306 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 SLC31A2O15432 143 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 IGKV1D-33P01593 117 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 IGKV1-33P01594 117 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 OR10A3P58181 314 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 FBLN7Q53RD9 439 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 CT45A1Q5HYN5 189 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 TGIF2LXQ8IUE1 241 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 CT45A3Q8NHU0 189 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 SETD6Q8TBK2 473 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 SSR3Q9UNL2 185 aa19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 TET2Q6N021 2002 aaPredicted RBP19.73■□□□□ 0.75
RAPGEF1-206ENST00000438647 TRBV6-6A0A0A6YYG2 114 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 TMEM272A0A1B0GTI8 110 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 FOXI3A8MTJ6 420 aaPredicted RBP19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 YPEL1O60688 119 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 FBXO24O75426 580 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 ZNF134P52741 427 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 LY6G6FQ5SQ64 297 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 ZNF880Q6PDB4 577 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 IZUMO1Q8IYV9 350 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 C11orf44Q8N8P7 122 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 OR52L2PQ8NGH6 319 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 YPEL2Q96QA6 119 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 ABHD14AQ9BUJ0 271 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 C12orf4Q9NQ89 552 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 TXNL4BQ9NX01 149 aaKnown RBP19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 AK3Q9UIJ7 227 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 WNK1Q9H4A3 2382 aa19.72■□□□□ 0.75
RAPGEF1-206ENST00000438647 FGF16O43320 207 aa19.71■□□□□ 0.75
RAPGEF1-206ENST00000438647 AMY1AP04745 511 aa19.71■□□□□ 0.75
RAPGEF1-206ENST00000438647 AMY2AP04746 511 aa19.71■□□□□ 0.75
RAPGEF1-206ENST00000438647 CSF1P09603 554 aa19.71■□□□□ 0.75
RAPGEF1-206ENST00000438647 TMEM50BP56557 158 aa19.71■□□□□ 0.75
RAPGEF1-206ENST00000438647 EBI3Q14213 229 aa19.71■□□□□ 0.75
RAPGEF1-206ENST00000438647 TMEM95Q3KNT9 176 aa19.71■□□□□ 0.75
RAPGEF1-206ENST00000438647 LYG1Q8N1E2 194 aa19.71■□□□□ 0.75
RAPGEF1-206ENST00000438647 ARHGAP5-AS1Q96IT6 56 aa19.71■□□□□ 0.75
RAPGEF1-206ENST00000438647 CD1BP29016 333 aa19.7■□□□□ 0.74
RAPGEF1-206ENST00000438647 PPP1CCP36873 323 aaKnown RBP19.7■□□□□ 0.74
RAPGEF1-206ENST00000438647 HNF4GQ14541 408 aa19.7■□□□□ 0.74
RAPGEF1-206ENST00000438647 GNMTQ14749 295 aa19.7■□□□□ 0.74
RAPGEF1-206ENST00000438647 OR2AK2Q8NG84 335 aa19.7■□□□□ 0.74
RAPGEF1-206ENST00000438647 OR2T10Q8NGZ9 312 aa19.7■□□□□ 0.74
RAPGEF1-206ENST00000438647 WIPF2Q8TF74 440 aaPredicted RBP19.7■□□□□ 0.74
RAPGEF1-206ENST00000438647 IL1F10Q8WWZ1 152 aa19.7■□□□□ 0.74
RAPGEF1-206ENST00000438647 PECRQ9BY49 303 aa19.7■□□□□ 0.74
RAPGEF1-206ENST00000438647 RAB6AP20340 208 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms