RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 SPANXA1Q9NS26 97 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 DNAJC27Q9NZQ0 273 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 DHCR7Q9UBM7 475 aaKnown RBP2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 MYO5BQ9ULV0 1848 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 PCM1Q15154 2024 aa2.37□□□□□ -2.03
LSM1P1-201ENST00000438629 MED23Q9ULK4 1368 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 A0A096LNJ9 63 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 OR5H14A6NHG9 310 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 FAM159BA6NKW6 160 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 NCBP2LA6PVI3 153 aaKnown RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 K7EMT4 169 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 K7ERU9 68 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 MANBAO00462 879 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 SS18L1O75177 396 aaPredicted RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 GGCTO75223 188 aaKnown RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 TNFSF15O95150 251 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 CD8AP01732 235 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 TSPAN19P0C672 248 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 OR56A5P0C7T3 313 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 PGA5P0DJD9 388 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 IGHV3-43DP0DP04 118 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 CD37P11049 281 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 ATF1P18846 271 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 HIST1H1TP22492 207 aaPredicted RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 DDTP30046 118 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 PYCR1P32322 319 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 PSMB2P49721 201 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 P2RX1P51575 399 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 PKIAP61925 76 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 TBPL1P62380 186 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 RHOBP62745 196 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 RPS21P63220 83 aaKnown RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 PSG4Q00888 419 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 FAM53BQ14153 422 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 ZNF266Q14584 549 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 RSU1Q15404 277 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 HLA-DRB5Q30154 266 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 CDNFQ49AH0 187 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 TMEM128Q5BJH2 165 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 COMMD7Q86VX2 200 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 CBLN2Q8IUK8 224 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 SPICQ8N5J4 248 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 OR52E4Q8NGH9 312 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 OR5AR1Q8NGP9 310 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 OR5J2Q8NH18 312 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 OR4S2Q8NH73 311 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 NAT14Q8WUY8 206 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 ACOT12Q8WYK0 555 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 TM4SF18Q96CE8 201 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 DNAJC19Q96DA6 116 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 GALNT14Q96FL9 552 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 MRAP2Q96G30 205 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 NARS2Q96I59 477 aaKnown RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 BTF3L4Q96K17 158 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 CAPZA3Q96KX2 299 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 RDH12Q96NR8 316 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 PITX2Q99697 317 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 GABRG3Q99928 467 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 CMSS1Q9BQ75 279 aaKnown RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 PARP12Q9H0J9 701 aaKnown RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 OR51I1Q9H343 314 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 CDC42EP4Q9H3Q1 356 aaKnown RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 LHX9Q9NQ69 397 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 FAM206AQ9NX38 181 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 OPTCQ9UBM4 332 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 VPS29Q9UBQ0 182 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 PRO0628Q9UI54 55 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 TBX21Q9UL17 535 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 BAIAP2Q9UQB8 552 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 ST3GAL6Q9Y274 331 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 TP53TG1Q9Y2A0 90 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 SIGLEC9Q9Y336 463 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 UTP11Q9Y3A2 253 aaKnown RBP2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 MED14O60244 1454 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 CCDC18Q5T9S5 1454 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 ARHGAP35Q9NRY4 1499 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 BCORL1Q5H9F3 1711 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 ABCA10Q8WWZ4 1543 aa2.36□□□□□ -2.03
LSM1P1-201ENST00000438629 ARHGAP31Q2M1Z3 1444 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 ZNFX1Q9P2E3 1918 aaKnown RBP2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 GAPVD1Q14C86 1478 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 IGHV3OR16-9A0A0B4J2B5 98 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 IGKV1D-13A0A0B4J2D9 117 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 EXOC1LA0A1B0GW35 172 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 DAPL1A0PJW8 107 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 F5H5K5 113 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 FAAHO00519 579 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 HMGB3O15347 200 aaKnown RBP2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 GYG2O15488 501 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 FOXH1O75593 365 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 SCO1O75880 301 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 SLC22A5O76082 557 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 BGLAPP02818 100 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 EIF4EP06730 217 aaKnown RBP2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 CRYGDP07320 174 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 C8GP07360 202 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 PGA4P0DJD7 388 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 PGA3P0DJD8 388 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 IGKV1-13P0DP09 117 aa2.35□□□□□ -2.03
LSM1P1-201ENST00000438629 IL1RNP18510 177 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms