RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 U3KQK5 164 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 DSCAML1Q8TD84 2053 aa6.11□□□□□ -1.43
VPS50-204ENST00000438395 LOC100130705A0A1B0GUX0 176 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 MYF6P23409 242 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 DCKP27707 260 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 ECI1P42126 302 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 GTF2A1P52655 376 aaPredicted RBP6.1□□□□□ -1.43
VPS50-204ENST00000438395 EBI3Q14213 229 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 Q3ZCU0 254 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 AWAT2Q6E213 333 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 RAB12Q6IQ22 244 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 ZNF529Q6P280 563 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 ASCL4Q6XD76 172 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 ZNF497Q6ZNH5 498 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 LINC00311Q8N616 119 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 Q8NFD4 153 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 OR10V1Q8NGI7 309 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 C4orf3Q8WVX3 66 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 RGP1Q92546 391 aaPredicted RBP6.1□□□□□ -1.43
VPS50-204ENST00000438395 SMIM19Q96E16 107 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 S1PR3Q99500 378 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 DCLRE1BQ9H816 532 aa6.1□□□□□ -1.43
VPS50-204ENST00000438395 ZNF107Q9UII5 783 aaPredicted RBP6.1□□□□□ -1.43
VPS50-204ENST00000438395 MRPS28Q9Y2Q9 187 aaKnown RBP6.1□□□□□ -1.43
VPS50-204ENST00000438395 EXOSC1Q9Y3B2 195 aaKnown RBP6.1□□□□□ -1.43
VPS50-204ENST00000438395 COL7A1Q02388 2944 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 C12orf77C9JDV5 145 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 H3BNX3 289 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 C15orf65H3BRN8 121 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 CA11O75493 328 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 RGS11O94810 467 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 IGHG4P01861 327 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 HBZP02008 142 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 MT-ND4P03905 459 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 OR8U8P0C7N1 319 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 LIMS3P0CW19 117 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 LIMS4P0CW20 117 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 SLC2A2P11168 524 aaPredicted RBP6.09□□□□□ -1.43
VPS50-204ENST00000438395 GABRB1P18505 474 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 CDX1P47902 265 aaPredicted RBP6.09□□□□□ -1.43
VPS50-204ENST00000438395 ETV1P50549 477 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 TAS2R43P59537 309 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 KIR2DS1Q14954 304 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 ZNF260Q3ZCT1 412 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 Q499Y3 187 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 YIF1BQ5BJH7 314 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 SYT6Q5T7P8 510 aaPredicted RBP6.09□□□□□ -1.43
VPS50-204ENST00000438395 OR2G6Q5TZ20 316 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 SLC25A48Q6ZT89 311 aaKnown RBP6.09□□□□□ -1.43
VPS50-204ENST00000438395 PQLC1Q8N2U9 271 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 Q8N9W7 124 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 OR4K15Q8NH41 348 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 CYGBQ8WWM9 190 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 THRSPQ92748 146 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 GHSRQ92847 366 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 MUL1Q969V5 352 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 MRPS24Q96EL2 167 aaKnown RBP6.09□□□□□ -1.43
VPS50-204ENST00000438395 PRR25Q96S07 402 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 ZNF251Q9BRH9 671 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 FGF20Q9NP95 211 aaPredicted RBP6.09□□□□□ -1.43
VPS50-204ENST00000438395 OR2S2Q9NQN1 319 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 PARP11Q9NR21 331 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 BABAM2Q9NXR7 383 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 SMPD3Q9NY59 655 aaPredicted RBP6.09□□□□□ -1.43
VPS50-204ENST00000438395 ZNF581Q9P0T4 197 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 KIAA1456Q9P272 454 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 ERGIC3Q9Y282 383 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 PEX16Q9Y5Y5 336 aa6.09□□□□□ -1.43
VPS50-204ENST00000438395 KMT2CQ8NEZ4 4911 aaKnown RBP6.09□□□□□ -1.43
VPS50-204ENST00000438395 NPIPB6E9PJ23 425 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 LANCL1O43813 399 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 CRTAPO75718 401 aaPredicted RBP6.08□□□□□ -1.44
VPS50-204ENST00000438395 BAG2O95816 211 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 MGMTP16455 207 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 MAPK3P27361 379 aaPredicted RBP6.08□□□□□ -1.44
VPS50-204ENST00000438395 INSL3P51460 131 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 LSAMPQ13449 338 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 PLGLAQ15195 96 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 FAM27D1Q5T7N8 215 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 STEAP3Q658P3 488 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 XAF1Q6GPH4 301 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 GLIPR1L1Q6UWM5 242 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 Q8N6K4 173 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 NKAIN3Q8N8D7 197 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 RNF152Q8N8N0 203 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 TMEM104Q8NE00 496 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 SETD9Q8NE22 299 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 OR13C5Q8NGS8 318 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 ABHD5Q8WTS1 349 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 KCTD7Q96MP8 289 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 RDH12Q96NR8 316 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 CHCHD6Q9BRQ6 235 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 ABHD14AQ9BUJ0 271 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 SELENOIQ9C0D9 397 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 CST11Q9H112 138 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 TAF9BQ9HBM6 251 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 MRPS18AQ9NVS2 196 aaKnown RBP6.08□□□□□ -1.44
VPS50-204ENST00000438395 ABRACLQ9P1F3 81 aa6.08□□□□□ -1.44
VPS50-204ENST00000438395 STEAP1Q9UHE8 339 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms