RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 CNOT2Q9NZN8 540 aaKnown RBP9.16□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 BAIAP2Q9UQB8 552 aa9.16□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 NUBP2Q9Y5Y2 271 aa9.16□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 IGHV3-43A0A0B4J1X8 118 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 TCRBV3S1A0A5B6 114 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 LOC110117498-PIK3R3F6TDL0 507 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 DEGS1O15121 323 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 SPRY2O43597 315 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 TRBV12-3P01733 135 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 IGHV3-43DP0DP04 118 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 RAP2AP10114 183 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 BMI1P35226 326 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 MAGEA2P43356 314 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 CRIP2P52943 208 aaPredicted RBP9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 NANOS2P60321 138 aaKnown RBP9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 PPP1R8Q12972 351 aaKnown RBP9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 APOFQ13790 326 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 CDK5R1Q15078 307 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 GUCA2BQ16661 112 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 C5orf64Q2M2E5 130 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 BCL2L15Q5TBC7 163 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 LAX1Q8IWV1 398 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 ZNF679Q8IYX0 411 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 BBS1Q8NFJ9 593 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 PLPPR1Q8TBJ4 325 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 RFT1Q96AA3 541 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 FAM103A1Q9BTL3 118 aaKnown RBP9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 OR52A1Q9UKL2 312 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 APLNQ9ULZ1 77 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 SELENOKQ9Y6D0 94 aa9.15□□□□□ -0.94
SMAD9-IT1-201ENST00000437983 LOC102724200A0A096LPH7 203 aaPredicted RBP9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 IGKV1-9A0A0C4DH69 117 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ERICH4A6NGS2 130 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 DHRS7CA6NNS2 312 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 TNFRSF11BO00300 401 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 MITFO75030 526 aaPredicted RBP9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 FKBP6O75344 327 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CYB5AP00167 134 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 TRGV3P03979 118 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 MRPL3P09001 348 aaKnown RBP9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 RIDAP52758 137 aaKnown RBP9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CX3CL1P78423 397 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 DEFA5Q01523 94 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 PDZK1IP1Q13113 114 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ZSCAN26Q16670 478 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ACTBL2Q562R1 376 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 RSBN1Q5VWQ0 802 aaPredicted RBP9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 OR10A7Q8NGE5 316 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 OR2K2Q8NGT1 345 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 APOL4Q9BPW4 351 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CHST5Q9GZS9 411 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 SCRT2Q9NQ03 307 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 FBXL17Q9UF56 701 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 IKZF2Q9UKS7 526 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 GAB2Q9UQC2 676 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ERGIC3Q9Y282 383 aa9.14□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 M0R2N4 97 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 FCN1O00602 326 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 SLC16A6O15403 523 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 NBR2O15453 112 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ZNF254O75437 659 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CDK2AP2O75956 126 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CST1P01037 141 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 EDN2P20800 178 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CCL1P22362 96 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 IL3RAP26951 378 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 RBP2P50120 134 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ALDH3A2P51648 485 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ZNF134P52741 427 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ATP1B3P54709 279 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 MTCP1P56278 107 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 RBMY1FQ15415 496 aaKnown RBP9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 OR2T5Q6IEZ7 315 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 PYHIN1Q6K0P9 492 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 FAHD1Q6P587 224 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 UNQ5815/PRO19632Q6UWF5 114 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 SLC25A48Q6ZT89 311 aaKnown RBP9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 TCTEX1D1Q8N7M0 179 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 AQP11Q8NBQ7 271 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CHST4Q8NCG5 386 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 OR2T29Q8NH02 315 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ABHD5Q8WTS1 349 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ZNF251Q9BRH9 671 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CST11Q9H112 138 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 REEP1Q9H902 201 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 SAMHD1Q9Y3Z3 626 aaKnown RBP9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 R4GMQ9 66 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 DNAH5Q8TE73 4624 aa9.13□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 TRAV24A0A0B4J272 114 aa9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ANKRD65E5RJM6 399 aa9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 H0YJX3 145 aa9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 SDCBPO00560 298 aaPredicted RBP9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 GNGT2O14610 69 aa9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 GATBO75879 557 aaKnown RBP9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 KDM4BO94953 1096 aa9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CTRB1P17538 263 aa9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 PAN3Q58A45 887 aaKnown RBP9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 ZNF660Q6AZW8 331 aaPredicted RBP9.12□□□□□ -0.95
SMAD9-IT1-201ENST00000437983 CTRB2Q6GPI1 263 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms