RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ADAP1O75689 374 aa9.81□□□□□ -0.84
SCN4A-201ENST00000435607 SUMO2P61956 95 aaKnown RBP9.81□□□□□ -0.84
SCN4A-201ENST00000435607 SPRED3Q2MJR0 410 aa9.81□□□□□ -0.84
SCN4A-201ENST00000435607 NRN1LQ496H8 165 aa9.81□□□□□ -0.84
SCN4A-201ENST00000435607 MAST2Q6P0Q8 1798 aa9.81□□□□□ -0.84
SCN4A-201ENST00000435607 CABIN1Q9Y6J0 2220 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 LOC389332A0A1B0GUA5 103 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 GCAP28676 217 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 POM121Q96HA1 1249 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 TMEM70Q9BUB7 260 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 DDA1Q9BW61 102 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 CNTD2Q9H8S5 307 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 FAM74A7A6NL05 159 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 CLDN14O95500 239 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 GPX1P07203 203 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 LY6EQ16553 131 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 ABHD3Q8WU67 409 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 KIR2DL4Q99706 377 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 BOLA1Q9Y3E2 137 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 CKS2P33552 79 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 REG1BP48304 166 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 ISXQ2M1V0 245 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 OR2V2Q96R30 315 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 MRPL13Q9BYD1 178 aaKnown RBP9.8□□□□□ -0.84
SCN4A-201ENST00000435607 IL19Q9UHD0 177 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 NMUP48645 174 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 TCL1AP56279 114 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 TTTY12Q9BZ98 90 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 TOGARAM1Q9Y4F4 1720 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 PAPPAQ13219 1627 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 ELOA3CA0A087WX78 387 aaPredicted RBP9.8□□□□□ -0.84
SCN4A-201ENST00000435607 LIPT2A6NK58 231 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 HPRT1P00492 218 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 IGLV3-25P01717 112 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 RPLP1P05386 114 aaKnown RBP9.8□□□□□ -0.84
SCN4A-201ENST00000435607 GEMIN2O14893 280 aaKnown RBP9.8□□□□□ -0.84
SCN4A-201ENST00000435607 PLPP2O43688 288 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 LIFP15018 202 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 DLX6P56179 175 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 ZNF56Q15929 161 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 DTX2Q86UW9 622 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 UBE2DNLQ8IWF7 75 aa9.8□□□□□ -0.84
SCN4A-201ENST00000435607 RBFOX3A6NFN3 312 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 CTLA4P16410 223 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 AESQ08117 197 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 TMEM255AQ5JRV8 349 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 TMEM88Q6PEY1 159 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 FAM159AQ6UWV7 190 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 OR4C13Q8NGP0 309 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 MGST3O14880 152 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 THY1P04216 161 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 HOXB1P14653 301 aaPredicted RBP9.79□□□□□ -0.84
SCN4A-201ENST00000435607 SLC25A35Q3KQZ1 300 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 LDLRAD3Q86YD5 345 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 GUCD1Q96NT3 240 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 SMCHD1A6NHR9 2005 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 CTSVO60911 334 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 FAM214BQ7L5A3 538 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 LRRC75AQ8NAA5 344 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 DOCK2Q92608 1830 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 PRR19A6NJB7 356 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 KCNAB3O43448 404 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 FGF5P12034 268 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 NUDT11Q96G61 164 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 MTFP1Q9UDX5 166 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 DOPEY2Q9Y3R5 2298 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 A0A0G2JLM5 398 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 CX3CL1P78423 397 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 SLC25A37Q9NYZ2 338 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 PRSS50Q9UI38 385 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 DXOO77932 396 aaKnown RBP9.79□□□□□ -0.84
SCN4A-201ENST00000435607 RECKO95980 971 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 LIPFP07098 398 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 RD3LP0DJH9 198 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 SELENOPP49908 381 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 DHRS2Q13268 280 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 SAMD13Q5VXD3 122 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 SHISA4Q96DD7 197 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 YAE1D1Q9NRH1 226 aa9.79□□□□□ -0.84
SCN4A-201ENST00000435607 SLC25A20O43772 301 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 CTAG2O75638 210 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 CD99P14209 185 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 NPPCP23582 126 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 C10orf128Q5T292 105 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 NPVFQ9HCQ7 196 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 FUCA1P04066 466 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 CTGFP29279 349 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 MRGPRGQ86SM5 289 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 MAP1LC3AQ9H492 121 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 IL17BQ9UHF5 180 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.78□□□□□ -0.84
SCN4A-201ENST00000435607 RPL29P47914 159 aaKnown RBP9.78□□□□□ -0.84
SCN4A-201ENST00000435607 POLR2GP62487 172 aaKnown RBP eCLIP9.78□□□□□ -0.84
SCN4A-201ENST00000435607 PPP1R1AQ13522 171 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 TMEM30BQ3MIR4 351 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 OR5AU1Q8NGC0 362 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 WNT2BQ93097 391 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 IGHV3-21A0A0B4J1V1 117 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 CDK2AP2O75956 126 aa9.78□□□□□ -0.84
SCN4A-201ENST00000435607 PHYHIPLQ96FC7 376 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms