RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 FAM215AQ9Y5M1 114 aa14.08□□□□□ -0.16
LIMK1-203ENST00000435201 ZFHX4Q86UP3 3567 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 KLK10O43240 276 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 OR8U9P0C7N5 309 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 TIMP3P35625 211 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 ARHGDIBP52566 201 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 RBMXL3Q8N7X1 1067 aaKnown RBP14.07□□□□□ -0.16
LIMK1-203ENST00000435201 HSD17B11Q8NBQ5 300 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 ZBTB34Q8NCN2 500 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 OR8U1Q8NH10 309 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 SNIP1Q8TAD8 396 aaKnown RBP14.07□□□□□ -0.16
LIMK1-203ENST00000435201 TMEM231Q9H6L2 316 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 UFSP2Q9NUQ7 469 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 RNF115Q9Y4L5 304 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 GTF3C1Q12789 2109 aa14.07□□□□□ -0.16
LIMK1-203ENST00000435201 C12orf77C9JDV5 145 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 RNASEK-C17orf49H0YIS7 233 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 DNASE2O00115 360 aaPredicted RBP14.06□□□□□ -0.16
LIMK1-203ENST00000435201 CHST1O43916 411 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 TSPAN15O95858 294 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 CD5P06127 495 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 OR3A1P47881 315 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 CAMLGP49069 296 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 DVL1P1P54792 670 aaPredicted RBP14.06□□□□□ -0.16
LIMK1-203ENST00000435201 DRAM1Q8N682 238 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 UBALD1Q8TB05 177 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 TOLLIPQ9H0E2 274 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 CACFD1Q9UGQ2 172 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 WASF3Q9UPY6 502 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 FAM96BQ9Y3D0 163 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 PRRC2CQ9Y520 2896 aaKnown RBP14.06□□□□□ -0.16
LIMK1-203ENST00000435201 A0A0G2JRQ6 117 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 PROB1E7EW31 1015 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 TRIM77I1YAP6 450 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 PTBP3O95758 552 aaKnown RBP14.06□□□□□ -0.16
LIMK1-203ENST00000435201 EPHA1P21709 976 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 IL2RGP31785 369 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 KRTCAP3Q53RY4 240 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 ZNF474Q6S9Z5 364 aaPredicted RBP14.06□□□□□ -0.16
LIMK1-203ENST00000435201 PUSL1Q8N0Z8 303 aaKnown RBP14.06□□□□□ -0.16
LIMK1-203ENST00000435201 ZNF645Q8N7E2 425 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 S100PBPQ96BU1 408 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 RAB40CQ96S21 281 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 SFXN3Q9BWM7 321 aa14.06□□□□□ -0.16
LIMK1-203ENST00000435201 SNAPINO95295 136 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 IGKV1-39P01597 117 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 PRH1P02810 166 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 IGKV1D-39P04432 117 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 ZNF83P51522 516 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 RPL23AP62750 156 aaKnown RBP14.05□□□□□ -0.16
LIMK1-203ENST00000435201 PAX5Q02548 391 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 AESQ08117 197 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 CLINT1Q14677 625 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 MSMO1Q15800 293 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 GUCA2BQ16661 112 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 OR5C1Q8NGR4 320 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 OR10Z1Q8NGY1 313 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 OR1L1Q8NH94 360 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 NINJ1Q92982 152 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 COQ2Q96H96 371 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 PARP12Q9H0J9 701 aaKnown RBP14.05□□□□□ -0.16
LIMK1-203ENST00000435201 SH3BGRL3Q9H299 93 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 C19orf12Q9NSK7 152 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 LOC400499M0QZD8 3231 aa14.05□□□□□ -0.16
LIMK1-203ENST00000435201 TMEM50AO95807 157 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 OMGP23515 440 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 GABRA2P47869 451 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 COL10A1Q03692 680 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 ZNF616Q08AN1 781 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 MIDNQ504T8 468 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 TRAT1Q6PIZ9 186 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 STX12Q86Y82 276 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 OR2Z1Q8NG97 314 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 LRRC29Q8WV35 223 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 MUCL1Q96DR8 90 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 KIAA1324LA8MWY0 1029 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-203ENST00000435201 UMAD1C9J7I0 102 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 M0R1B8 84 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 AGPAT2O15120 278 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 HBZP02008 142 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 CRYAAP02489 173 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 ZNF16P17020 682 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-203ENST00000435201 ATF4P18848 351 aaPredicted RBP14.04□□□□□ -0.16
LIMK1-203ENST00000435201 CD80P33681 288 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 ID4P47928 161 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 ASCL1P50553 236 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 DYNLT3P51808 116 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 PAX9P55771 341 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 KRBOX4Q5JUW0 171 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 FAM90A1Q86YD7 464 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 ODF3L1Q8IXM7 274 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 LURAP1Q96LR2 239 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 CACNG5Q9UF02 275 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 WSB1Q9Y6I7 421 aa14.04□□□□□ -0.16
LIMK1-203ENST00000435201 DMXL1Q9Y485 3027 aa14.03□□□□□ -0.16
LIMK1-203ENST00000435201 NUPL2O15504 423 aaKnown RBP14.03□□□□□ -0.16
LIMK1-203ENST00000435201 NXPH3O95157 252 aa14.03□□□□□ -0.16
LIMK1-203ENST00000435201 IGHV3-13P01766 116 aa14.03□□□□□ -0.16
LIMK1-203ENST00000435201 SFTA3P0C7M3 94 aa14.03□□□□□ -0.16
LIMK1-203ENST00000435201 GLRXP35754 106 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms