RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TMEM9BQ9NQ34 198 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 C14orf105Q9NVL8 296 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 MED29Q9NX70 200 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 TBX21Q9UL17 535 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 LSM5Q9Y4Y9 91 aaKnown RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 RFNGQ9Y644 331 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 DOCK5Q9H7D0 1870 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 ARAP1Q96P48 1450 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 PIKFYVEQ9Y2I7 2098 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 HECW2Q9P2P5 1572 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 A0A087WX48 190 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 IGKV1D-13A0A0B4J2D9 117 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 FAM236DA0A1B0GTK5 79 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 LYRM9A8MSI8 78 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 K7EQS6 105 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 TP53I11O14683 189 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 GNG7O60262 68 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 STK16O75716 305 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 SOX14O95416 240 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 PFN1P07737 140 aaKnown RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 METTL15P1P0C7V9 234 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 PGA4P0DJD7 388 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 PGA3P0DJD8 388 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 PGA5P0DJD9 388 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 IGKV1-13P0DP09 117 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 FAM236CP0DP71 79 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 CRISP2P16562 243 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 CXCL2P19875 107 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 RAB5AP20339 215 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 CD34P28906 385 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 IL12AP29459 219 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 TSPOP30536 169 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 RND2P52198 227 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR12D2P58182 307 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 SELENOTP62341 195 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 ZNF266Q14584 549 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 ATP6AP1LQ52LC2 224 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 ZNF684Q5T5D7 378 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 TPTE2P1Q5T6R2 138 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR2T5Q6IEZ7 315 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 RWDD4Q6NW29 188 aaKnown RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 STRADAQ7RTN6 431 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OAFQ86UD1 273 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 LRRC28Q86X40 367 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 C4orf33Q8N1A6 199 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 ZNF283Q8N7M2 679 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 ZNF439Q8NDP4 499 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 TSTD1Q8NFU3 115 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR10G4Q8NGN3 311 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR2T29Q8NH02 315 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR1S1Q8NH92 325 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 OR51E1Q8TCB6 317 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 CHCHD10Q8WYQ3 142 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 TMEM158Q8WZ71 300 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 PTX4Q96A99 478 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 APOBEC3DQ96AK3 386 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 RCN3Q96D15 328 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 REEP6Q96HR9 211 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 DNAJC30Q96LL9 226 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 SERPINI1Q99574 410 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 MROQ9BYG7 248 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 FAM96AQ9H5X1 160 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 KCNJ16Q9NPI9 418 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 BTRCQ9Y297 605 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 DYSFO75923 2080 aa1.86□□□□□ -2.11
CLK1-204ENST00000432425 IBTKQ9P2D0 1353 aaPredicted RBP1.86□□□□□ -2.11
CLK1-204ENST00000432425 CITO14578 2027 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 TTC37Q6PGP7 1564 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 OVOS2A0A0J9YW53 1432 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 NCOA1Q15788 1441 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 OVOS2Q6IE36 1432 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 SMG6Q86US8 1419 aaKnown RBP1.85□□□□□ -2.11
CLK1-204ENST00000432425 VPS8Q8N3P4 1428 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 IGHV3OR16-13A0A075B7E8 117 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 MEIKINA0A087WXM9 373 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 LOC102724200A0A096LPH7 203 aaPredicted RBP1.85□□□□□ -2.11
CLK1-204ENST00000432425 IGHV2OR16-5A0A0B4J2B6 119 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 FAAHO00519 579 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 PIAS1O75925 651 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 UBBP0CG47 229 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 SULT1A3P0DMM9 295 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 SULT1A4P0DMN0 295 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 CT45A6P0DMU7 189 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 CT45A5P0DMU8 189 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 CT45A7P0DMV0 189 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 CD99P14209 185 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 GGT1P19440 569 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 BTCP35070 178 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 APLNRP35414 380 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 OR1E2P47887 323 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 EVX1P49640 407 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 TAS2R19P59542 299 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 GNG5P63218 68 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 SLC35A2P78381 396 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 SLC35A1P78382 337 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 OR8B8Q15620 311 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 NRF1Q16656 503 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 LTC4SQ16873 150 aa1.85□□□□□ -2.11
CLK1-204ENST00000432425 ACOT6Q3I5F7 207 aaPredicted RBP1.85□□□□□ -2.11
CLK1-204ENST00000432425 CT45A1Q5HYN5 189 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms