RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 OR2F1Q13607 317 aa13.96□□□□□ -0.17
USHBP1-203ENST00000431146 TMEM268Q5VZI3 342 aa13.96□□□□□ -0.17
USHBP1-203ENST00000431146 SLC35E4Q6ICL7 350 aa13.96□□□□□ -0.17
USHBP1-203ENST00000431146 LGI3Q8N145 548 aa13.96□□□□□ -0.17
USHBP1-203ENST00000431146 ST6GALNAC3Q8NDV1 305 aa13.96□□□□□ -0.17
USHBP1-203ENST00000431146 OR10V1Q8NGI7 309 aa13.96□□□□□ -0.17
USHBP1-203ENST00000431146 OR1S1Q8NH92 325 aa13.96□□□□□ -0.17
USHBP1-203ENST00000431146 ESRP2Q9H6T0 727 aaKnown RBP13.96□□□□□ -0.17
USHBP1-203ENST00000431146 GCM1Q9NP62 436 aa13.96□□□□□ -0.17
USHBP1-203ENST00000431146 UBE2J1Q9Y385 318 aaPredicted RBP13.96□□□□□ -0.17
USHBP1-203ENST00000431146 RAI1Q7Z5J4 1906 aaPredicted RBP13.96□□□□□ -0.17
USHBP1-203ENST00000431146 MSGN1A6NI15 193 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 CYB5R3P00387 301 aaPredicted RBP13.96□□□□□ -0.18
USHBP1-203ENST00000431146 CCL8P80075 99 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 ZNF345Q14585 488 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 PRSS54Q6PEW0 395 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 FAM185AQ8N0U4 392 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 ZNRF1Q8ND25 227 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 OR13A1Q8NGR1 328 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 NEUROG1Q92886 237 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 TMEM222Q9H0R3 208 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 KCNIP1Q9NZI2 227 aa13.96□□□□□ -0.18
USHBP1-203ENST00000431146 RBM7Q9Y580 266 aaKnown RBP13.96□□□□□ -0.18
USHBP1-203ENST00000431146 LRBAP50851 2863 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 KANTRA0A1W2PQU2 76 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 PGLYRP1O75594 196 aaPredicted RBP13.95□□□□□ -0.18
USHBP1-203ENST00000431146 SSTR5P35346 364 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 RND3P61587 244 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 CDSNQ15517 529 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 CMTM1Q8IZ96 169 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 LRTM2Q8N967 370 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.95□□□□□ -0.18
USHBP1-203ENST00000431146 OR51H1Q8NH63 302 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 DNTTIP1Q9H147 329 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 IL19Q9UHD0 177 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 PRELID3BQ9Y3B1 194 aa13.95□□□□□ -0.18
USHBP1-203ENST00000431146 LSM5Q9Y4Y9 91 aaKnown RBP13.95□□□□□ -0.18
USHBP1-203ENST00000431146 RPS10-NUDT3A0A1W2PQS6 291 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 NPIPB11E5RHQ5 1161 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 ZNF737O75373 536 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 LHBP01229 141 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 IGLV2-14P01704 120 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 HBZP02008 142 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 HEXAP06865 529 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 OR8U9P0C7N5 309 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 CFHR2P36980 270 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 LUMP51884 338 aaPredicted RBP13.94□□□□□ -0.18
USHBP1-203ENST00000431146 GNMTQ14749 295 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 OR52L2PQ8NGH6 319 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 OR52M1Q8NGK5 317 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 OR8U1Q8NH10 309 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 RFESDQ8TAC1 157 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 LINC01560Q8TB33 94 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 KCNS2Q9ULS6 477 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 PPP1R3CQ9UQK1 317 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 OOEPA6NGQ2 149 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 POM121CA8CG34 1229 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 BCL2L11O43521 198 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 RLN2P04090 185 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 SELLP14151 372 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 ASCL1P50553 236 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 KDF1Q8NAX2 398 aaPredicted RBP13.94□□□□□ -0.18
USHBP1-203ENST00000431146 DEFB108BQ8NET1 73 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 GALMQ96C23 342 aa13.94□□□□□ -0.18
USHBP1-203ENST00000431146 ZNF471Q9BX82 626 aaPredicted RBP13.94□□□□□ -0.18
USHBP1-203ENST00000431146 PKD1L2Q7Z442 2459 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 IGHV3-43A0A0B4J1X8 118 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 A0A1B0GW55 424 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 TSPAN4O14817 238 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 DUX4L2P0CJ85 424 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 DUX4L3P0CJ86 424 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 DUX4L4P0CJ87 422 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 DUX4L5P0CJ88 424 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 DUX4L6P0CJ89 424 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 DUX4L7P0CJ90 424 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 IGHV3-43DP0DP04 118 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 IL2RGP31785 369 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 GATA4P43694 442 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 ANKRD39Q53RE8 183 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 DUX4L9Q6RFH8 374 aaPredicted RBP13.93□□□□□ -0.18
USHBP1-203ENST00000431146 ZNF695Q8IW36 515 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 PLPPR2Q96GM1 343 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 DUX4Q9UBX2 424 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 ZDHHC8Q9ULC8 765 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 GATCO43716 136 aaKnown RBP13.93□□□□□ -0.18
USHBP1-203ENST00000431146 SCO1O75880 301 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 MBPP02686 304 aaPredicted RBP13.93□□□□□ -0.18
USHBP1-203ENST00000431146 HOXA1P49639 335 aaPredicted RBP13.93□□□□□ -0.18
USHBP1-203ENST00000431146 LTC4SQ16873 150 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 SELENOHQ8IZQ5 122 aaKnown RBP13.93□□□□□ -0.18
USHBP1-203ENST00000431146 BVESQ8NE79 360 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 ST8SIA2Q92186 375 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 CNTNAP3BQ96NU0 1288 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 CNTNAP3Q9BZ76 1288 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 PRORYQ9H606 182 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 RNF7Q9UBF6 113 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 RNF150Q9ULK6 438 aa13.93□□□□□ -0.18
USHBP1-203ENST00000431146 ANKHD1Q8IWZ3 2542 aaKnown RBP13.92□□□□□ -0.18
USHBP1-203ENST00000431146 F5H0A9 414 aaPredicted RBP13.92□□□□□ -0.18
USHBP1-203ENST00000431146 LYL1P12980 280 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms