RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 LGALS4P56470 323 aa13.65□□□□□ -0.22
UBE3D-204ENST00000430071 CDNFQ49AH0 187 aa13.65□□□□□ -0.22
UBE3D-204ENST00000430071 ZNF626Q68DY1 528 aa13.65□□□□□ -0.22
UBE3D-204ENST00000430071 HEPN1Q6WQI6 88 aa13.65□□□□□ -0.22
UBE3D-204ENST00000430071 C5orf24Q7Z6I8 188 aa13.65□□□□□ -0.22
UBE3D-204ENST00000430071 RFESDQ8TAC1 157 aa13.65□□□□□ -0.22
UBE3D-204ENST00000430071 UBALD1Q8TB05 177 aa13.65□□□□□ -0.22
UBE3D-204ENST00000430071 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
UBE3D-204ENST00000430071 CCDC59Q9P031 241 aaKnown RBP13.65□□□□□ -0.22
UBE3D-204ENST00000430071 SMIM31A0A1B0GVY4 71 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 C12orf77C9JDV5 145 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 NPIPB11E5RHQ5 1161 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 ZNF701M0R085 212 aaPredicted RBP13.64□□□□□ -0.23
UBE3D-204ENST00000430071 HPGDSO60760 199 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 SCGNO76038 276 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 EIF4EP06730 217 aaKnown RBP13.64□□□□□ -0.23
UBE3D-204ENST00000430071 GZMHP20718 246 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 SOX6P35712 828 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 HABP2Q14520 560 aaPredicted RBP13.64□□□□□ -0.23
UBE3D-204ENST00000430071 SSX2Q16385 188 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 ZNF260Q3ZCT1 412 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 FOXB2Q5VYV0 432 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 ZNF880Q6PDB4 577 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 TMEM219Q86XT9 240 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 DTX3Q8N9I9 347 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 OR11H6Q8NGC7 330 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 AP3S1Q92572 193 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 CMSS1Q9BQ75 279 aaKnown RBP13.64□□□□□ -0.23
UBE3D-204ENST00000430071 C12orf4Q9NQ89 552 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.64□□□□□ -0.23
UBE3D-204ENST00000430071 SESN1Q9Y6P5 492 aa13.64□□□□□ -0.23
UBE3D-204ENST00000430071 FAM172BPA6NC97 362 aa13.63□□□□□ -0.23
UBE3D-204ENST00000430071 FBLN7Q53RD9 439 aa13.63□□□□□ -0.23
UBE3D-204ENST00000430071 Q6ZS46 218 aa13.63□□□□□ -0.23
UBE3D-204ENST00000430071 IZUMO1Q8IYV9 350 aa13.63□□□□□ -0.23
UBE3D-204ENST00000430071 C11orf44Q8N8P7 122 aa13.63□□□□□ -0.23
UBE3D-204ENST00000430071 ARL11Q969Q4 196 aa13.63□□□□□ -0.23
UBE3D-204ENST00000430071 KIRREL1Q96J84 757 aa13.63□□□□□ -0.23
UBE3D-204ENST00000430071 SLIRPQ9GZT3 109 aaKnown RBP13.63□□□□□ -0.23
UBE3D-204ENST00000430071 CHMP1AQ9HD42 196 aaPredicted RBP13.63□□□□□ -0.23
UBE3D-204ENST00000430071 HILPDAQ9Y5L2 63 aa13.63□□□□□ -0.23
UBE3D-204ENST00000430071 TRAV18A0A075B6X5 111 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 TRBV6-6A0A0A6YYG2 114 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 A0A0A6YYH2 397 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 IGHV2-26A0A0B4J1V2 119 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 TMEM235A6NFC5 223 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 A6NJ64 397 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 SERPINE3A8MV23 424 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 ORC5O43913 435 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 APOA1P02647 267 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 ELK1P19419 428 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 AANATQ16613 207 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 LTC4SQ16873 150 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 C6orf183Q5T699 404 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 MZT2AQ6P582 158 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 OR13D1Q8NGV5 346 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 OR1L1Q8NH94 360 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 PHF21AQ96BD5 680 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 S100A16Q96FQ6 103 aaKnown RBP13.62□□□□□ -0.23
UBE3D-204ENST00000430071 DCUN1D5Q9BTE7 237 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 TMEM133Q9H2Q1 129 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 MIXL1Q9H2W2 232 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 RIMS4Q9H426 269 aaPredicted RBP13.62□□□□□ -0.23
UBE3D-204ENST00000430071 TAF9BQ9HBM6 251 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 DIABLOQ9NR28 239 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 IDI2-AS1Q9NZ38 188 aa13.62□□□□□ -0.23
UBE3D-204ENST00000430071 VGLL3A8MV65 326 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 XRCC3O43542 346 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 HBZP02008 142 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 GSTP1P09211 210 aaKnown RBP13.61□□□□□ -0.23
UBE3D-204ENST00000430071 CD3GP09693 182 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 KIR2DS4P43632 304 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 DEFA6Q01524 100 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 ARL6IP1Q15041 203 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 HACD4Q5VWC8 232 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 FAM53AQ6NSI3 398 aaPredicted RBP13.61□□□□□ -0.23
UBE3D-204ENST00000430071 TRAT1Q6PIZ9 186 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 SETD6Q8TBK2 473 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 DGCR14Q96DF8 476 aaKnown RBP13.61□□□□□ -0.23
UBE3D-204ENST00000430071 MALSU1Q96EH3 234 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 CMTM3Q96MX0 182 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 NDUFA13Q9P0J0 144 aa13.61□□□□□ -0.23
UBE3D-204ENST00000430071 TBL2Q9Y4P3 447 aaKnown RBP13.61□□□□□ -0.23
UBE3D-204ENST00000430071 A6NDX4 124 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 F2RL2O00254 374 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 CTDSP2O14595 271 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 TIMM23O14925 209 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 SSX5O60225 188 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 FCGR3AP08637 254 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 PTHLHP12272 177 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 NFYBP25208 207 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 ARFRP1Q13795 201 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 HMGN3Q15651 99 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 ZNF554Q86TJ5 538 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 PRR18Q8N4B5 295 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 OR10A7Q8NGE5 316 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 NUDCD2Q8WVJ2 157 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 LEAP2Q969E1 77 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 AUNIPQ9H7T9 357 aa13.6□□□□□ -0.23
UBE3D-204ENST00000430071 ZNF702PQ9H963 129 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms