RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 MMP28Q9H239 520 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 OCEL1Q9H607 264 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 ZNF286AQ9HBT8 521 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 OR2S2Q9NQN1 319 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 AMMECR1Q9Y4X0 333 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-204ENST00000429629 POMT1Q9Y6A1 747 aa12.14□□□□□ -0.47
GARNL3-204ENST00000429629 TMEM235A6NFC5 223 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 CCDC160A6NGH7 325 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 LEUTXA8MZ59 168 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 LY6LH3BQJ8 138 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 BUB1B-PAK6H3BSN5 160 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 HLA-DQB1P01920 261 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 CTXN2P0C2S0 81 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 ELK1P19419 428 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 ZBTB25P24278 435 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 GNG2P59768 71 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 HLA-DRB3P79483 266 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 KRTAP21-3Q3LHN1 58 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 MORN2Q502X0 79 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 TMEM69Q5SWH9 247 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 OR1L1Q8NH94 360 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 SSMEM1Q8WWF3 244 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 C22orf15Q8WYQ4 148 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 CYYR1Q96J86 154 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 GNG12Q9UBI6 72 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 ADAM30Q9UKF2 790 aa12.13□□□□□ -0.47
GARNL3-204ENST00000429629 JMJD1CQ15652 2540 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 DPPA5A6NC42 116 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 SULT1C2O00338 296 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 HPGDSO60760 199 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 EIF4EP06730 217 aaKnown RBP12.12□□□□□ -0.47
GARNL3-204ENST00000429629 ZNF137PP52743 207 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 PRB3Q04118 309 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-204ENST00000429629 BAIAP2L2Q6UXY1 529 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 SLC25A48Q6ZT89 311 aaKnown RBP12.12□□□□□ -0.47
GARNL3-204ENST00000429629 SIGLECL1Q8N7X8 197 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 ZNF439Q8NDP4 499 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 ZDHHC16Q969W1 377 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 CABLES2Q9BTV7 478 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 MMP27Q9H306 513 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 DPAGT1Q9H3H5 408 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 SCPEP1Q9HB40 452 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 ZNRD1Q9P1U0 126 aa12.12□□□□□ -0.47
GARNL3-204ENST00000429629 FABP7O15540 132 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 SSX5O60225 188 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 SCTP09683 121 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 PRSS3P35030 304 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 IER3P46695 156 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 TAS2R20P59543 309 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 MADCAM1Q13477 382 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 CCDC144NLQ6NUI1 221 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 HOGA1Q86XE5 327 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 PRIMA1Q86XR5 153 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 PRR18Q8N4B5 295 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 OR5R1Q8NH85 324 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 SETD6Q8TBK2 473 aa12.11□□□□□ -0.47
GARNL3-204ENST00000429629 ELF5Q9UKW6 265 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-204ENST00000429629 TRBV6-7A0A0A0MS04 114 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 A0A1W2PRD5 423 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 A0A1W2PRF3 423 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 A0A1W2PRM7 423 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 CTDSP2O14595 271 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 IL3RAP26951 378 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 ARHGDIBP52566 201 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 RPL15P61313 204 aaKnown RBP12.1□□□□□ -0.47
GARNL3-204ENST00000429629 BAMBIQ13145 260 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 CT45A1Q5HYN5 189 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 LDLRAD2Q5SZI1 272 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 CNIH2Q6PI25 160 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 LHFPL4Q7Z7J7 247 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 ZDHHC22Q8N966 263 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 CT45A3Q8NHU0 189 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 EDARADDQ8WWZ3 215 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 ST6GALNAC6Q969X2 333 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 MIXL1Q9H2W2 232 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 BATF3Q9NR55 127 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 ANAPC10Q9UM13 185 aa12.1□□□□□ -0.47
GARNL3-204ENST00000429629 SOX21Q9Y651 276 aaPredicted RBP12.1□□□□□ -0.47
GARNL3-204ENST00000429629 IGKV1-6A0A0C4DH72 117 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 A6NHS1 94 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 FAM25AB3EWG3 89 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 FAM25CB3EWG5 89 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 FAM25GB3EWG6 89 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 TRIM77I1YAP6 450 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 RGS5O15539 181 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 GSTT2P0CG29 244 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 GSTT2BP0CG30 244 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 NAT1P18440 290 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 RAB7AP51149 207 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 ZNF134P52741 427 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 MRPS10P82664 201 aaKnown RBP12.09□□□□□ -0.47
GARNL3-204ENST00000429629 ZNF816Q0VGE8 651 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-204ENST00000429629 SLC9A3R2Q15599 337 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 LTC4SQ16873 150 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 UTF1Q5T230 341 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 TPTE2P1Q5T6R2 138 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 OR8H3Q8N146 312 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 OR52L2PQ8NGH6 319 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 OR10X1Q8NGY0 326 aa12.09□□□□□ -0.47
GARNL3-204ENST00000429629 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms