RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 MRPL28Q13084 256 aaKnown RBP14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 TMEM30BQ3MIR4 351 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 SYT6Q5T7P8 510 aaPredicted RBP14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 DDI2Q5TDH0 399 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 ADAMTSL5Q6ZMM2 481 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 OR4K15Q8NH41 348 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 OR1L1Q8NH94 360 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 RGP1Q92546 391 aaPredicted RBP14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 ZNF251Q9BRH9 671 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 TM2D3Q9BRN9 247 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 ANKRD60Q9BZ19 345 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 PAK1IP1Q9NWT1 392 aaPredicted RBP14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 ORC6Q9Y5N6 252 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 TNCP24821 2201 aa14.15□□□□□ -0.14
UPK3BP1-201ENST00000428678 LDLRAD4O15165 306 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 PPP3R1P63098 170 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 ECSCRQ19T08 205 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 SLC22A6Q4U2R8 563 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 C6orf183Q5T699 404 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 C1orf146Q5VVC0 180 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 ACSM6Q6P461 480 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 GPR148Q8TDV2 347 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 RITA1Q96K30 269 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 TMEM138Q9NPI0 162 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 ERVK13-1Q9NX77 482 aa14.14□□□□□ -0.15
UPK3BP1-201ENST00000428678 IGHV4OR15-8A0A075B7B6 117 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 A0A087WW49 117 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 A0A1W2PP11 408 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 MCRIP1C9JLW8 97 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 NBR2O15453 112 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 FADS2O95864 444 aaKnown RBP14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 OR8U9P0C7N5 309 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 IGHV4-30-4P0DP06 118 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 GTF2F2P13984 249 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 GTF2A1P52655 376 aaPredicted RBP14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 PITPNAQ00169 270 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 C5orf64Q2M2E5 130 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 ZIK1Q3SY52 487 aaPredicted RBP14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 STEAP3Q658P3 488 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 MINDY2Q8NBR6 621 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 CASTOR1Q8WTX7 329 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 TMEM106AQ96A25 262 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 MRPL20Q9BYC9 149 aaKnown RBP14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 TOLLIPQ9H0E2 274 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 EDA2RQ9HAV5 297 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 SPACA1Q9HBV2 294 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 ETAA1Q9NY74 926 aa14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 MRPS28Q9Y2Q9 187 aaKnown RBP14.13□□□□□ -0.15
UPK3BP1-201ENST00000428678 A0A1W2PN81 502 aa14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 MAGEA13PA6NCF6 341 aa14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 ZNF780AO75290 641 aaPredicted RBP14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 LGALS1P09382 135 aaKnown RBP14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 CHRNA7P36544 502 aa14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 LIN54Q6MZP7 749 aa14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 HAPLN4Q86UW8 402 aa14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 OR4C12Q96R67 309 aa14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 AMBNQ9NP70 447 aa14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 KIAA1456Q9P272 454 aa14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 ERGIC3Q9Y282 383 aa14.12□□□□□ -0.15
UPK3BP1-201ENST00000428678 ALPLP05186 524 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 RCC1P18754 421 aaPredicted RBP14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 BDKRB2P30411 391 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 ADARB1P78563 741 aaKnown RBP14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 NDPQ00604 133 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 GNMTQ14749 295 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 TRAT1Q6PIZ9 186 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 NABP2Q9BQ15 211 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 ABHD14AQ9BUJ0 271 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 CST11Q9H112 138 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 OR2S2Q9NQN1 319 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 FOXA2Q9Y261 457 aaPredicted RBP14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 A3GALT2U3KPV4 340 aa14.11□□□□□ -0.15
UPK3BP1-201ENST00000428678 EI24O14681 340 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 SOX15O60248 233 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 IGHV3-11P01762 117 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 MORN2Q502X0 79 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 RAB12Q6IQ22 244 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 SGPP2Q8IWX5 399 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 OR52L2PQ8NGH6 319 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 ABHD5Q8WTS1 349 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 ORAI1Q96D31 301 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 ZNF184Q99676 751 aaPredicted RBP14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 TAF9BQ9HBM6 251 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 TPSG1Q9NRR2 321 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 RCC2Q9P258 522 aaKnown RBP14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 FBXO7Q9Y3I1 522 aa14.1□□□□□ -0.15
UPK3BP1-201ENST00000428678 PPP1CCP36873 323 aaKnown RBP14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 RAB40BQ12829 278 aa14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 GPR176Q14439 515 aa14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 C19orf54Q5BKX5 351 aa14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 LYPD6Q86Y78 171 aa14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 NPBQ8NG41 125 aa14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 OR52I1Q8NGK6 324 aa14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 RSRP1Q9BUV0 290 aa14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 GMPPBQ9Y5P6 360 aa14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 PEX16Q9Y5Y5 336 aa14.09□□□□□ -0.15
UPK3BP1-201ENST00000428678 HSPA12AO43301 675 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 GABRB1P18505 474 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 OR3A3P47888 321 aa14.08□□□□□ -0.16
UPK3BP1-201ENST00000428678 VEGFCP49767 419 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms