RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CNTFRP26992 372 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 RAB25P57735 213 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 LSAMPQ13449 338 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 FOXE3Q13461 319 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 MORN2Q502X0 79 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 TTC23Q5W5X9 447 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 MRPL30Q8TCC3 161 aaKnown RBP12.13□□□□□ -0.47
SEC13-210ENST00000428626 TFAP2CQ92754 450 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 DPF1Q92782 380 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 FAM46BQ96A09 425 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 MCRIP2Q9BUT9 160 aaKnown RBP12.13□□□□□ -0.47
SEC13-210ENST00000428626 GPR61Q9BZJ8 451 aa12.13□□□□□ -0.47
SEC13-210ENST00000428626 MBNL3Q9NUK0 354 aaKnown RBP12.13□□□□□ -0.47
SEC13-210ENST00000428626 LANCL1O43813 399 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 CRTAPO75718 401 aaPredicted RBP12.12□□□□□ -0.47
SEC13-210ENST00000428626 IGHG4P01861 327 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 ELANEP08246 267 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 SLC2A2P11168 524 aaPredicted RBP12.12□□□□□ -0.47
SEC13-210ENST00000428626 CELP19835 753 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 FUT3P21217 361 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 PPP1CCP36873 323 aaKnown RBP12.12□□□□□ -0.47
SEC13-210ENST00000428626 CAPGP40121 348 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
SEC13-210ENST00000428626 CD69Q07108 199 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 KIAA0141Q14154 515 aaPredicted RBP12.12□□□□□ -0.47
SEC13-210ENST00000428626 KIR2DS1Q14954 304 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 CXorf66Q5JRM2 361 aaPredicted RBP12.12□□□□□ -0.47
SEC13-210ENST00000428626 C6orf141Q5SZD1 244 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 C6orf183Q5T699 404 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 FAM27D1Q5T7N8 215 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 CDH26Q8IXH8 852 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 DHRSXQ8N5I4 330 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 FBLIM1Q8WUP2 373 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 KCTD7Q96MP8 289 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 OR2S2Q9NQN1 319 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 CHCHD3Q9NX63 227 aaKnown RBP12.12□□□□□ -0.47
SEC13-210ENST00000428626 PSORS1C1Q9UIG5 152 aa12.12□□□□□ -0.47
SEC13-210ENST00000428626 STAB2Q8WWQ8 2551 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 FAM90A10PA6NDY2 464 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 EFCAB10A6NFE3 127 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 FAM90A7PA6NKC0 464 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 FAM90A23PA8MXZ1 464 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 G3V318 75 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 EBAG9O00559 213 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 TXNL1O43396 289 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 IGF1P05019 195 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 VSIG8P0DPA2 414 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 MYF6P23409 242 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 PSMB8P28062 276 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 SOX6P35712 828 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 DGCR2P98153 550 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 FHL3Q13643 280 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 ASPHD1Q5U4P2 390 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 STEAP3Q658P3 488 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 OR10K2Q6IF99 312 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 AHSA2Q719I0 299 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 SETD9Q8NE22 299 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 OR8H1Q8NGG4 311 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 OR8U1Q8NH10 309 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 MYOZ3Q8TDC0 251 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 SULT4A1Q9BR01 284 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 MRPL20Q9BYC9 149 aaKnown RBP12.11□□□□□ -0.47
SEC13-210ENST00000428626 KLK15Q9H2R5 256 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 KCNK15Q9H427 330 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 FKBP14Q9NWM8 211 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 CNOT2Q9NZN8 540 aaKnown RBP12.11□□□□□ -0.47
SEC13-210ENST00000428626 ZNF107Q9UII5 783 aaPredicted RBP12.11□□□□□ -0.47
SEC13-210ENST00000428626 SCOCQ9UIL1 159 aa12.11□□□□□ -0.47
SEC13-210ENST00000428626 PDCD6O75340 191 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 CA11O75493 328 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 CD1AP06126 327 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 PPIFP30405 207 aaKnown RBP12.1□□□□□ -0.47
SEC13-210ENST00000428626 OR3A3P47888 321 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 WNT4P56705 351 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 TAS2R43P59537 309 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 TMEM30BQ3MIR4 351 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 LRRTM1Q86UE6 522 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 PACRGLQ8N7B6 248 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 NANOGP1Q8N7R0 232 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 PRR25Q96S07 402 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 NABP2Q9BQ15 211 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 ABHD14AQ9BUJ0 271 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 GNB4Q9HAV0 340 aa12.1□□□□□ -0.47
SEC13-210ENST00000428626 LSM4Q9Y4Z0 139 aaKnown RBP12.1□□□□□ -0.47
SEC13-210ENST00000428626 RRP9O43818 475 aaKnown RBP12.09□□□□□ -0.47
SEC13-210ENST00000428626 GLAP06280 429 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 VDAC1P21796 283 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 CHATP28329 748 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 ACTBP60709 375 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 MED21Q13503 144 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 RCN1Q15293 331 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 MMDQ15546 238 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 NKAPLQ5M9Q1 402 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 TRAT1Q6PIZ9 186 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 BPIFB6Q8NFQ5 453 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 C4orf3Q8WVX3 66 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 UQCC2Q9BRT2 126 aa12.09□□□□□ -0.47
SEC13-210ENST00000428626 GON7Q9BXV9 100 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms