RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 BTF3L4Q96K17 158 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 MESP1Q9BRJ9 268 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 SRD5A3Q9H8P0 318 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 SLC45A2Q9UMX9 530 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 OR2W1Q9Y3N9 320 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 K7N7A8 449 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 DXOO77932 396 aaKnown RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 ERGP11308 486 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 LCN2P80188 198 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 ZXDCQ2QGD7 858 aaPredicted RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 MPV17LQ2QL34 196 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 MOGAT2Q3SYC2 334 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 KLF14Q8TD94 323 aaPredicted RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 Q8WTZ3 238 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 STARD4Q96DR4 205 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 TLNRD1Q9H1K6 362 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 ZNF552Q9H707 407 aaPredicted RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 RCC2Q9P258 522 aaKnown RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 METTL1Q9UBP6 276 aaKnown RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 GREB1LQ9C091 1923 aaPredicted RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 TMEM91Q6ZNR0 172 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 COMMD1Q8N668 190 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 WNT2BQ93097 391 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 ADTRPQ96IZ2 230 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 TCEAL7Q9BRU2 100 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 AMTP48728 403 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 TCTAP57738 103 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 CD300CQ08708 224 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 P2RY6Q15077 328 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 SF3B6Q9Y3B4 125 aaKnown RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 SDK2Q58EX2 2172 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 CST4P01036 141 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 GALR1P47211 349 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 CEACAM21Q3KPI0 293 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 MUC15Q8N387 334 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 OR1L1Q8NH94 360 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 ZNF519Q8TB69 540 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 ZNF764Q96H86 408 aaPredicted RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 RAB33BQ9H082 229 aa8.41□□□□□ -1.06
SNX13-203ENST00000428135 MTCL1Q9Y4B5 1905 aaKnown RBP8.41□□□□□ -1.06
SNX13-203ENST00000428135 RAB19A4D1S5 217 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 TMEM229AB2RXF0 380 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 VDAC1P21796 283 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 HTR1DP28221 377 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 ERVFRD-1P60508 538 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 VKORC1L1Q8N0U8 176 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 ST6GALNAC2Q9UJ37 374 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 ELF5Q9UKW6 265 aaPredicted RBP8.4□□□□□ -1.06
SNX13-203ENST00000428135 CTSDP07339 412 aaPredicted RBP8.4□□□□□ -1.06
SNX13-203ENST00000428135 NQO2P16083 231 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 CXCL3P19876 107 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 CRYBA2P53672 197 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 TEX261Q6UWH6 196 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 RPS4Y2Q8TD47 263 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 CACFD1Q9UGQ2 172 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 WSB1Q9Y6I7 421 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 U3KQ87 197 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 TO15178 435 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 GATCO43716 136 aaKnown RBP8.4□□□□□ -1.06
SNX13-203ENST00000428135 SMPD2O60906 423 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 ZNF658BQ4V348 819 aaPredicted RBP8.4□□□□□ -1.06
SNX13-203ENST00000428135 FAM181AQ8N9Y4 354 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 CXorf58Q96LI9 332 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 MIXL1Q9H2W2 232 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 S4R3C0 116 aa8.4□□□□□ -1.06
SNX13-203ENST00000428135 WNT9BO14905 357 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 IGHV3-23P01764 117 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 C16orf82Q7Z2V1 217 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 C5orf17Q8NAS9 161 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 RGP1Q92546 391 aaPredicted RBP8.4□□□□□ -1.07
SNX13-203ENST00000428135 NIT2Q9NQR4 276 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 HSBP1O75506 76 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 TRAPPC2P0DI81 140 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 TRAPPC2BP0DI82 140 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 TMEM50BP56557 158 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 FAM216AQ8WUB2 273 aa8.4□□□□□ -1.07
SNX13-203ENST00000428135 PPIAL4CA0A0B4J2A2 164 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 PPIAL4GP0DN37 164 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 NPBWR2P48146 333 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 RANP62826 216 aaKnown RBP8.39□□□□□ -1.07
SNX13-203ENST00000428135 LHFPL6Q9Y693 200 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 ARHGEF17Q96PE2 2063 aaPredicted RBP8.39□□□□□ -1.07
SNX13-203ENST00000428135 IGKV3-20P01619 116 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 RCC1P18754 421 aaPredicted RBP8.39□□□□□ -1.07
SNX13-203ENST00000428135 AANATQ16613 207 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 TMEM140Q9NV12 185 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 IGHV3OR16-13A0A075B7E8 117 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 IGKV3D-11A0A0A0MRZ8 115 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 IGHV3-74A0A0B4J1X5 117 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 RAB29O14966 203 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 IGKV3-11P04433 115 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 CDKN1AP38936 164 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 C10orf113Q5VZT2 155 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 C8orf82Q6P1X6 216 aaPredicted RBP8.39□□□□□ -1.07
SNX13-203ENST00000428135 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 NOL4LQ96MY1 436 aaPredicted RBP8.39□□□□□ -1.07
SNX13-203ENST00000428135 CACNA1HO95180 2353 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 FCGR3AP08637 254 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 RAB5AP20339 215 aa8.39□□□□□ -1.07
SNX13-203ENST00000428135 NPY1RP25929 384 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms