RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 SYNGR1O43759 233 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF780AO75290 641 aaPredicted RBP4.45□□□□□ -1.7
C9orf3-205ENST00000427193 FCN3O75636 299 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 RHBDL1O75783 438 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 CLPXO76031 633 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 APOA1P02647 267 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 HAAOP46952 286 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 POU3F4P49335 361 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 GPM6AP51674 278 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 BMXP51813 675 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 ATP1B3P54709 279 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 CLDN12P56749 244 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 RPS27AP62979 156 aaKnown RBP4.45□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF146Q15072 292 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 OR8G1Q15617 311 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 AGAP6Q5VW22 663 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 TEX36Q5VZQ5 186 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 Q6P435 159 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 GAPTQ8N292 157 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 OR51D1Q8NGF3 324 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 LGALS14Q8TCE9 139 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 MRPS24Q96EL2 167 aaKnown RBP4.45□□□□□ -1.7
C9orf3-205ENST00000427193 BORCS8Q96FH0 119 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 CPNE2Q96FN4 548 aaPredicted RBP4.45□□□□□ -1.7
C9orf3-205ENST00000427193 ST6GAL2Q96JF0 529 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 OR2V2Q96R30 315 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 DCUN1D5Q9BTE7 237 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 SLITRK2Q9H156 845 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 LPAR5Q9H1C0 372 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.45□□□□□ -1.7
C9orf3-205ENST00000427193 DAPK2Q9UIK4 370 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF222Q9UK12 451 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 SLC7A11Q9UPY5 501 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 KCNK7Q9Y2U2 307 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 LSM4Q9Y4Z0 139 aaKnown RBP4.45□□□□□ -1.7
C9orf3-205ENST00000427193 V9GYH0 126 aa4.45□□□□□ -1.7
C9orf3-205ENST00000427193 A0A0A6YYH2 397 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 FAM230AA0A1W2PPH8 454 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 A6NJ64 397 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 A8MV72 311 aaPredicted RBP4.44□□□□□ -1.7
C9orf3-205ENST00000427193 TMEM178BH3BS89 294 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 IFNL4K9M1U5 179 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ANGPTL7O43827 346 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF737O75373 536 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 HLA-DQB1P01920 261 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 MELTFP08582 738 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ELK1P19419 428 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 GIFP27352 417 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 SRP9P49458 86 aaKnown RBP4.44□□□□□ -1.7
C9orf3-205ENST00000427193 RBM11P57052 281 aaKnown RBP4.44□□□□□ -1.7
C9orf3-205ENST00000427193 FGF12P61328 243 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 TNFAIP6P98066 277 aaPredicted RBP4.44□□□□□ -1.7
C9orf3-205ENST00000427193 MZT1Q08AG7 82 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 P2RY14Q15391 338 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 RAB11BQ15907 218 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF79Q15937 498 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 C2orf68Q2NKX9 166 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 HES5Q5TA89 166 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 PRAMEF6Q5VXH4 476 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 GGNBP1Q5YKI7 109 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 OR10K2Q6IF99 312 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 HAGHLQ6PII5 290 aaPredicted RBP4.44□□□□□ -1.7
C9orf3-205ENST00000427193 GLIPR1L1Q6UWM5 242 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF826PQ6ZT77 177 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 SLC25A26Q70HW3 274 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 LAX1Q8IWV1 398 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 JAGN1Q8N5M9 183 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 OR2Z1Q8NG97 314 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 OR8H1Q8NGG4 311 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 OR5D18Q8NGL1 313 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 OR51F2Q8NH61 342 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ANGPTL6Q8NI99 470 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 KCNG3Q8TAE7 436 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 TRMT10AQ8TBZ6 339 aaKnown RBP4.44□□□□□ -1.7
C9orf3-205ENST00000427193 NPRL2Q8WTW4 380 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 TNFAIP8L1Q8WVP5 186 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ITLN1Q8WWA0 313 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ST8SIA4Q92187 359 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 AP3S1Q92572 193 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 YIPF5Q969M3 257 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 RFT1Q96AA3 541 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 PERPQ96FX8 193 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 CYYR1Q96J86 154 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 FAM210AQ96ND0 272 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 SDHCQ99643 169 aaPredicted RBP4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ASCL2Q99929 193 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 NEURL2Q9BR09 285 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 WDR13Q9H1Z4 485 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 KCNK15Q9H427 330 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 NEK6Q9HC98 313 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 HMG20AQ9NP66 347 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 FAIMQ9NVQ4 179 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 RASL12Q9NYN1 266 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ZNF581Q9P0T4 197 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 HSF4Q9ULV5 492 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 ANAPC10Q9UM13 185 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 MRPS28Q9Y2Q9 187 aaKnown RBP4.44□□□□□ -1.7
C9orf3-205ENST00000427193 RBMX2Q9Y388 322 aaKnown RBP4.44□□□□□ -1.7
C9orf3-205ENST00000427193 CACNG2Q9Y698 323 aa4.44□□□□□ -1.7
C9orf3-205ENST00000427193 IGKV1D-17A0A075B6S4 117 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms