RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 HNRNPCP07910 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
GINS3-203ENST00000426538 S100GP29377 79 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 GNRHRP30968 328 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 FCN2Q15485 313 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 LTC4SQ16873 150 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 PHLDA2Q53GA4 152 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 CMTM1Q8IZ96 169 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 C12orf45Q8N5I9 185 aaPredicted RBP12.51□□□□□ -0.41
GINS3-203ENST00000426538 CCDC71LQ8N9Z2 235 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 OR8B3Q8NGG8 313 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 CASTOR1Q8WTX7 329 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 TMEM230Q96A57 120 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 OR8B2Q96RD0 313 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 PHB2Q99623 299 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 GNG12Q9UBI6 72 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 DCHS2Q6V1P9 2916 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 IGKV1D-13A0A0B4J2D9 117 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 GPR31O00270 319 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 DUS4LO95620 317 aaKnown RBP12.51□□□□□ -0.41
GINS3-203ENST00000426538 IGKV1-13P0DP09 117 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 CD83Q01151 205 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 FAM185AQ8N0U4 392 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 RTN4IP1Q8WWV3 396 aaPredicted RBP12.51□□□□□ -0.41
GINS3-203ENST00000426538 GAL3ST2Q9H3Q3 398 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 SLC2A9Q9NRM0 540 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 TAS2R3Q9NYW6 316 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 JPT1Q9UK76 154 aa12.51□□□□□ -0.41
GINS3-203ENST00000426538 USF3Q68DE3 2245 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 LRRK2Q5S007 2527 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 IGHV3-43A0A0B4J1X8 118 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 F2RL2O00254 374 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 HSD17B6O14756 317 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 SFT2D2O95562 160 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 OR8U9P0C7N5 309 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 CGB3P0DN86 165 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 CGB7P0DN87 165 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 IGHV3-43DP0DP04 118 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 ANXA3P12429 323 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 OMGP23515 440 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 CD34P28906 385 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 PPP1CCP36873 323 aaKnown RBP12.5□□□□□ -0.41
GINS3-203ENST00000426538 C17orf58Q2M2W7 97 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 ZNF818PQ6ZRF7 136 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 OR8U1Q8NH10 309 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 MITD1Q8WV92 249 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 EDARADDQ8WWZ3 215 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 IGFBPL1Q8WX77 278 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 NEIL1Q96FI4 390 aaPredicted RBP12.5□□□□□ -0.41
GINS3-203ENST00000426538 TOLLIPQ9H0E2 274 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 CCL28Q9NRJ3 127 aa12.5□□□□□ -0.41
GINS3-203ENST00000426538 CRYM-AS1A6NIL9 109 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 A8MV72 311 aaPredicted RBP12.49□□□□□ -0.41
GINS3-203ENST00000426538 RGS11O94810 467 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 WNT2P09544 360 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 SULT1A3P0DMM9 295 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 SULT1A4P0DMN0 295 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 SLC9A3R2Q15599 337 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 TMEM200BQ69YZ2 307 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 OR11H7Q8NGC8 314 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 ZNF714Q96N38 554 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 C19orf12Q9NSK7 152 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 MGAT4CQ9UBM8 478 aa12.49□□□□□ -0.41
GINS3-203ENST00000426538 TRBV23-1A0A0A0MS06 115 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 YPEL1O60688 119 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 FCN3O75636 299 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 SLC22A5O76082 557 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 IFNA2P01563 188 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 CXCL3P19876 107 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 COL8A1P27658 744 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 SUPT4H1P63272 117 aaKnown RBP12.48□□□□□ -0.41
GINS3-203ENST00000426538 CD300CQ08708 224 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 GNMTQ14749 295 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 MORN2Q502X0 79 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 ZNF841Q6ZN19 808 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 ZNF295-AS1Q8N0V1 137 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 OR2AK2Q8NG84 335 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 COQ8AQ8NI60 647 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 YPEL2Q96QA6 119 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 RANGRFQ9HD47 186 aaPredicted RBP12.48□□□□□ -0.41
GINS3-203ENST00000426538 IDI2-AS1Q9NZ38 188 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 KCNS2Q9ULS6 477 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 UTP20O75691 2785 aaKnown RBP12.48□□□□□ -0.41
GINS3-203ENST00000426538 MPPED1O15442 326 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 PDLIM4P50479 330 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 ZNF273Q14593 569 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 TMEM30BQ3MIR4 351 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 LIN54Q6MZP7 749 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 KCTD9Q7L273 389 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 TCF23Q7RTU1 214 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 ZNF525Q8N782 197 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 AKR1E2Q96JD6 320 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 ST6GAL2Q96JF0 529 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 PARP12Q9H0J9 701 aaKnown RBP12.48□□□□□ -0.41
GINS3-203ENST00000426538 NARFLQ9H6Q4 476 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 NAA60Q9H7X0 242 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 LINC00574Q9H8X3 128 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 PATZ1Q9HBE1 687 aaKnown RBP12.48□□□□□ -0.41
GINS3-203ENST00000426538 DSCAML1Q8TD84 2053 aa12.48□□□□□ -0.41
GINS3-203ENST00000426538 A0A1W2PPH5 198 aa12.47□□□□□ -0.41
GINS3-203ENST00000426538 IGHV4-39P01824 125 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms