RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 LHX4Q969G2 390 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 BOD1Q96IK1 185 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 SLC39A9Q9NUM3 307 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 CLN8Q9UBY8 286 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 TMED3Q9Y3Q3 217 aa11.43□□□□□ -0.58
USP42-203ENST00000426246 INTS1Q8N201 2190 aaKnown RBP11.43□□□□□ -0.58
USP42-203ENST00000426246 CRYAAP02489 173 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 RTP5Q14D33 572 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 DEFB108BQ8NET1 73 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 KIAA1549Q9HCM3 1950 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 PLXNB1O43157 2135 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 TRDCB7Z8K6 153 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 PHOX2AO14813 284 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 WNT9BO14905 357 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 G6PCP35575 357 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 RPS23P62266 143 aaKnown RBP11.42□□□□□ -0.58
USP42-203ENST00000426246 ADGRG7Q96K78 797 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 OR2J1Q9GZK6 312 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 GSN-AS1Q9NRJ2 163 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 BOKQ9UMX3 212 aaPredicted RBP11.42□□□□□ -0.58
USP42-203ENST00000426246 CD5P06127 495 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 SRD5A2P31213 254 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 UBE2NP61088 152 aaKnown RBP11.42□□□□□ -0.58
USP42-203ENST00000426246 MRGPRDQ8TDS7 321 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 NINJ1Q92982 152 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 MOB3AQ96BX8 217 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 TMEM222Q9H0R3 208 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 COA4Q9NYJ1 87 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 SH3BGRL2Q9UJC5 107 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 ATRXP46100 2492 aa11.42□□□□□ -0.58
USP42-203ENST00000426246 YLPM1P49750 1951 aaKnown RBP11.41□□□□□ -0.58
USP42-203ENST00000426246 hCG_38984A0A1B0GV85 526 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 SPINK4O60575 86 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 CXCL1P09341 107 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 AESQ08117 197 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 TMEM164Q5U3C3 297 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 RTL6Q6ICC9 239 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 SPNS3Q6ZMD2 512 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 SELENOHQ8IZQ5 122 aaKnown RBP11.41□□□□□ -0.58
USP42-203ENST00000426246 TMEM54Q969K7 222 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 GPR146Q96CH1 333 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 DCTN5Q9BTE1 182 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 TOLLIPQ9H0E2 274 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 RPRMQ9NS64 109 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 B4GALT7Q9UBV7 327 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 C21orf140B9A014 251 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 OR3A1P47881 315 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 CCL11P51671 97 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 SURF2Q15527 256 aaPredicted RBP11.41□□□□□ -0.58
USP42-203ENST00000426246 Q6ZPA2 131 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 FAM58AQ8N1B3 248 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 C15orf54Q8N8G6 183 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 CABLES2Q9BTV7 478 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 GPR87Q9BY21 358 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 DOK5Q9P104 306 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 LAMP3Q9UQV4 416 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 POMT1Q9Y6A1 747 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 AKAP13Q12802 2813 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 CLEC18AA5D8T8 446 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 PPP1R2P9O14990 202 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 NDUFS6O75380 124 aaKnown RBP11.41□□□□□ -0.58
USP42-203ENST00000426246 SEC11BP0C7V7 166 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 CHRNA7P36544 502 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 CD200P41217 278 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 CLEC18CQ8NCF0 446 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 OR4F5Q8NH21 305 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 ABHD14BQ96IU4 210 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 OR4F4Q96R69 305 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 TM2D1Q9BX74 207 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 CDH20Q9HBT6 801 aa11.41□□□□□ -0.58
USP42-203ENST00000426246 A0A087WZY1 265 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 TLE4Q04727 773 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 ZNF383Q8NA42 475 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 SMIM7Q9BQ49 75 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 BSNQ9UPA5 3926 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 CXorf65A6NEN9 183 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 AP4M1O00189 453 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 CST2P09228 141 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 CCL1P22362 96 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 EDDM3BP56851 147 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 SRSF4Q08170 494 aaKnown RBP11.4□□□□□ -0.58
USP42-203ENST00000426246 HERPUD1Q15011 391 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 HIST3H3Q16695 136 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 C10orf128Q5T292 105 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 Q6ZRM9 215 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 GATAD1Q8WUU5 269 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 SSX3Q99909 188 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 FOXD3Q9UJU5 478 aaPredicted RBP11.4□□□□□ -0.58
USP42-203ENST00000426246 KALRNO60229 2985 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 SPG11Q96JI7 2443 aa11.4□□□□□ -0.58
USP42-203ENST00000426246 NPIPB13A6NJU9 1138 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 ZNF716A6NP11 495 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 NPIPB4C9JG80 1138 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 PGLYRP1O75594 196 aaPredicted RBP11.4□□□□□ -0.59
USP42-203ENST00000426246 TNFSF15O95150 251 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 SERPINA7P05543 415 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 CRYGSP22914 178 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 IL13RA2Q14627 380 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 GGNQ86UU5 652 aa11.4□□□□□ -0.59
USP42-203ENST00000426246 VKORC1L1Q8N0U8 176 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms