RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 DERL3Q96Q80 235 aa13.91□□□□□ -0.18
GPC1-203ENST00000425056 RASL11BQ9BPW5 248 aa13.91□□□□□ -0.18
GPC1-203ENST00000425056 HSPB9Q9BQS6 159 aa13.91□□□□□ -0.18
GPC1-203ENST00000425056 C8orf4Q9NR00 106 aa13.91□□□□□ -0.18
GPC1-203ENST00000425056 MBNL3Q9NUK0 354 aaKnown RBP13.91□□□□□ -0.18
GPC1-203ENST00000425056 ZMAT5Q9UDW3 170 aaKnown RBP13.91□□□□□ -0.18
GPC1-203ENST00000425056 ZNF580Q9UK33 172 aa13.91□□□□□ -0.18
GPC1-203ENST00000425056 PEX16Q9Y5Y5 336 aa13.91□□□□□ -0.18
GPC1-203ENST00000425056 A0A1W2PPK0 400 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 LANCL1O43813 399 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 GLAP06280 429 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 RCC1P18754 421 aaPredicted RBP13.9□□□□□ -0.18
GPC1-203ENST00000425056 ADARB1P78563 741 aaKnown RBP13.9□□□□□ -0.18
GPC1-203ENST00000425056 CD69Q07108 199 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 LSAMPQ13449 338 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 DOC2BQ14184 412 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 LRRC36Q1X8D7 754 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 SIGIRRQ6IA17 410 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 UNQ9370/PRO34162Q6UXP9 181 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 LCNL1Q6ZST4 164 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 ZNF554Q86TJ5 538 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 PRR18Q8N4B5 295 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 PACRGLQ8N7B6 248 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 NKAIN3Q8N8D7 197 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 SELENOIQ9C0D9 397 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 BANF2Q9H503 90 aa13.9□□□□□ -0.18
GPC1-203ENST00000425056 CNOT2Q9NZN8 540 aaKnown RBP13.9□□□□□ -0.18
GPC1-203ENST00000425056 KMT2CQ8NEZ4 4911 aaKnown RBP13.9□□□□□ -0.18
GPC1-203ENST00000425056 PNMA8CA0A1B0GUJ8 204 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 EFCAB10A6NFE3 127 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 CASQ2O14958 399 aaPredicted RBP13.89□□□□□ -0.19
GPC1-203ENST00000425056 ATP6V1G2O95670 118 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 IGHG4P01861 327 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 MAS1P04201 325 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 IGF1P05019 195 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 CD1AP06126 327 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 FUT3P21217 361 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 SOX6P35712 828 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 CAPGP40121 348 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 F2RL1P55085 397 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 DGCR2P98153 550 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 KIR2DS1Q14954 304 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 DEFB136Q30KP8 78 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 DHRSXQ8N5I4 330 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 THRSPQ92748 146 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 TAF9BQ9HBM6 251 aa13.89□□□□□ -0.19
GPC1-203ENST00000425056 PDCD6O75340 191 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 CRTAPO75718 401 aaPredicted RBP13.88□□□□□ -0.19
GPC1-203ENST00000425056 VDAC1P21796 283 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 RAB25P57735 213 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 MORN2Q502X0 79 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 LAIR2Q6ISS4 152 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 OR5M8Q8NGP6 311 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 C4orf3Q8WVX3 66 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 TFAP2CQ92754 450 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 RBMXL1Q96E39 390 aaKnown RBP13.88□□□□□ -0.19
GPC1-203ENST00000425056 CYYR1Q96J86 154 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 UQCC2Q9BRT2 126 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 OR2S2Q9NQN1 319 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 JPT1Q9UK76 154 aa13.88□□□□□ -0.19
GPC1-203ENST00000425056 UBE2QL1A1L167 161 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 MYL12BO14950 172 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 RAMP3O60896 148 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 OR5H8P0DN80 308 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 CELP19835 753 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 MAPK3P27361 379 aaPredicted RBP13.87□□□□□ -0.19
GPC1-203ENST00000425056 PSMB8P28062 276 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 LUMP51884 338 aaPredicted RBP13.87□□□□□ -0.19
GPC1-203ENST00000425056 WNT4P56705 351 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 FHL3Q13643 280 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 GNMTQ14749 295 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 MMDQ15546 238 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 C6orf141Q5SZD1 244 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 MRPL30Q8TCC3 161 aaKnown RBP13.87□□□□□ -0.19
GPC1-203ENST00000425056 MYOZ3Q8TDC0 251 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 ABHD14AQ9BUJ0 271 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.87□□□□□ -0.19
GPC1-203ENST00000425056 GHRLQ9UBU3 117 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 NKX1-2Q9UD57 310 aaPredicted RBP13.87□□□□□ -0.19
GPC1-203ENST00000425056 PSORS1C1Q9UIG5 152 aa13.87□□□□□ -0.19
GPC1-203ENST00000425056 ZNF107Q9UII5 783 aaPredicted RBP13.87□□□□□ -0.19
GPC1-203ENST00000425056 NBEAL2Q6ZNJ1 2754 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 GNAO1P09471 354 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 SLC2A2P11168 524 aaPredicted RBP13.86□□□□□ -0.19
GPC1-203ENST00000425056 HTD2P86397 168 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 C9orf66Q5T8R8 295 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 AHSA2Q719I0 299 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 ODF3L1Q8IXM7 274 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 C8orf59Q8N0T1 100 aaPredicted RBP13.86□□□□□ -0.19
GPC1-203ENST00000425056 FBLIM1Q8WUP2 373 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 FAM46BQ96A09 425 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 KCTD7Q96MP8 289 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 CHCHD6Q9BRQ6 235 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 CST11Q9H112 138 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 VCXQ9H320 206 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 VCX3BQ9H321 246 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 KCNIP1Q9NZI2 227 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 TENM3Q9P273 2699 aa13.86□□□□□ -0.19
GPC1-203ENST00000425056 MYF6P23409 242 aa13.85□□□□□ -0.19
GPC1-203ENST00000425056 PPP1CCP36873 323 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms