RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 CENPVQ7Z7K6 275 aaPredicted RBP9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 SELENOHQ8IZQ5 122 aaKnown RBP9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 MRPL30Q8TCC3 161 aaKnown RBP9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 ADIPOR1Q96A54 375 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 Q96M66 194 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 SIGLEC12Q96PQ1 595 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 C11orf1Q9H5F2 150 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 CCL28Q9NRJ3 127 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 CPAMD8Q8IZJ3 1885 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 A6NCN8 305 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 YPEL1O60688 119 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 CBLN1P23435 193 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 ADMP35318 185 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 DAP3P51398 398 aaKnown RBP9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 BLKP51451 505 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 RANP62826 216 aaKnown RBP9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 CLEC2AQ6UVW9 174 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 TEX43Q6ZNM6 134 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 DOK3Q7L591 496 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 H1FOOQ8IZA3 346 aaPredicted RBP9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 OR10V1Q8NGI7 309 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 YPEL2Q96QA6 119 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 WNT10AQ9GZT5 417 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 TMEM222Q9H0R3 208 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 SLC39A9Q9NUM3 307 aa9.69□□□□□ -0.86
SEC61A1-202ENST00000424880 UBE2L5PA0A1B0GUS4 154 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 TMEM150CB9EJG8 249 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 EFNA2O43921 213 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 CIDEAO60543 219 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 SCTP09683 121 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 OR5G3P0C626 314 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 C1QTNF9P0C862 333 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 THBS3P49746 956 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 MEF2BQ02080 365 aaPredicted RBP9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 TGFBR3Q03167 851 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 HLA-BQ31612 363 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 TPTE2P1Q5T6R2 138 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 Q6ZRM9 215 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 RPP25LQ8N5L8 163 aaKnown RBP9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 SLC35E1Q96K37 410 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 DECR2Q9NUI1 292 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 TMEM106BQ9NUM4 274 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 ST3GAL6Q9Y274 331 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 IGHV3-15A0A0B4J1V0 119 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 TRAV1-1A0A0B4J248 108 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 RRP8O43159 456 aaKnown RBP9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 GYPAP02724 150 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF16P17020 682 aaPredicted RBP9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 LTBRP36941 435 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 GFERP55789 205 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 ACOT6Q3I5F7 207 aaPredicted RBP9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 SPANXN5Q5MJ07 72 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 FFAR4Q5NUL3 377 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 SAXO1Q8IYX7 474 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 PNRC2Q9NPJ4 139 aaKnown RBP9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 TAAR3PQ9P1P4 343 aa9.68□□□□□ -0.86
SEC61A1-202ENST00000424880 IGKV1-12A0A0C4DH73 117 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 SERF1AO75920 110 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 IGKV1D-12P01611 117 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 MDH2P40926 338 aaKnown RBP9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 TMEM196Q5HYL7 178 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 PRR31Q5SQ13 230 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 GCNT2Q8N0V5 402 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 LRTM2Q8N967 370 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 OR2V1Q8NHB1 315 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 SSC4DQ8WTU2 575 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF501Q96CX3 271 aaPredicted RBP9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 PLSCR2Q9NRY7 297 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 WDFY4Q6ZS81 3184 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 HEATR1Q9H583 2144 aaKnown RBP9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 ALG1L2C9J202 215 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 PAGE4O60829 102 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF114Q8NC26 417 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF721Q8TF20 911 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 KCNE4Q8WWG9 221 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 ZC2HC1AQ96GY0 325 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 SAMD10Q9BYL1 202 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 TRAV39A0A0B4J263 110 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 TOMM40O96008 361 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 Q6ZSR6 202 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 SMIM15Q7Z3B0 74 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF295-AS1Q8N0V1 137 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF837Q96EG3 531 aaPredicted RBP9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 PARD6GQ9BYG4 376 aaPredicted RBP9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 ZNF576Q9H609 170 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 TMEM9BQ9NQ34 198 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 TP53TG3Q9ULZ0 132 aa9.67□□□□□ -0.86
SEC61A1-202ENST00000424880 COL9A1P20849 921 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 NPBWR2P48146 333 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 SLC35B1P78383 322 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 CYP2G1PQ6ZSU1 146 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 OR2M3Q8NG83 312 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 OIT3Q8WWZ8 545 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 MOB3AQ96BX8 217 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 TXN2Q99757 166 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 A0A1W2PQF6 199 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 HSBP1L1C9JCN9 74 aa9.66□□□□□ -0.86
SEC61A1-202ENST00000424880 KBTBD11O94819 623 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms