RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 SSX5O60225 188 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 IGHV3-7P01780 117 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 HLA-DQB1P01920 261 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 SCTP09683 121 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 IGHV3-43DP0DP04 118 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 KIR2DS4P43632 304 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 KIR2DS1Q14954 304 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 LAX1Q8IWV1 398 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 OR52L2PQ8NGH6 319 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 OR9G1Q8NH87 305 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 ZNF596Q8TC21 504 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 IL1F10Q8WWZ1 152 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 SLC6A7Q99884 636 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 OR2S2Q9NQN1 319 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 EXTL2Q9UBQ6 330 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 PSG11Q9UQ72 335 aa13.82□□□□□ -0.2
FOXN4-203ENST00000423960 J3QR06 171 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 PTHLHP12272 177 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 PRSS3P35030 304 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 DEFB112Q30KQ8 113 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 STEAP3Q658P3 488 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 FAM53AQ6NSI3 398 aaPredicted RBP13.81□□□□□ -0.2
FOXN4-203ENST00000423960 Q6ZS49 121 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 BEND2Q8NDZ0 799 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 OR10V1Q8NGI7 309 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 OR4A4PQ8NGN8 299 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 MAFIPQ8WZ33 124 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 OCSTAMPQ9BR26 566 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 MMP27Q9H306 513 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 JPT1Q9UK76 154 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 TBL2Q9Y4P3 447 aaKnown RBP13.81□□□□□ -0.2
FOXN4-203ENST00000423960 A3GALT2U3KPV4 340 aa13.81□□□□□ -0.2
FOXN4-203ENST00000423960 FABP7O15540 132 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 TPPPO94811 219 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 IGLV1-47P01700 117 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 GSTT2P0CG29 244 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 GSTT2BP0CG30 244 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 HTR1DP28221 377 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 CBX5P45973 191 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 GNG10P50151 68 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 TUSC1Q2TAM9 212 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 Q3ZCU0 254 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 MORN2Q502X0 79 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 MINOS1Q5TGZ0 78 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 CNIH2Q6PI25 160 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 RBMS3Q6XE24 437 aaKnown RBP13.8□□□□□ -0.2
FOXN4-203ENST00000423960 LHFPL4Q7Z7J7 247 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 SNX29P2Q8IUI4 249 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 SIGLECL1Q8N7X8 197 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 C8orf31Q8N9H6 132 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 ZNF418Q8TF45 676 aaPredicted RBP13.8□□□□□ -0.2
FOXN4-203ENST00000423960 TMEM158Q8WZ71 300 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 ZDHHC16Q969W1 377 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 ZNF48Q96MX3 618 aaPredicted RBP13.8□□□□□ -0.2
FOXN4-203ENST00000423960 BATF3Q9NR55 127 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 MINOS1-NBL1R4GNA1 71 aa13.8□□□□□ -0.2
FOXN4-203ENST00000423960 A0A1W2PPE3 182 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 YPEL1O60688 119 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 RGS11O94810 467 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 FBP1P09467 338 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 ZBTB25P24278 435 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 PPP1CCP36873 323 aaKnown RBP13.79□□□□□ -0.2
FOXN4-203ENST00000423960 MADCAM1Q13477 382 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 GNMTQ14749 295 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 HLA-DRB5Q30154 266 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 OR4P4Q8NGL7 312 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 SPATA3Q8NHX4 192 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 C15orf40Q8WUR7 153 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 C17orf50Q8WW18 174 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 CREB3L1Q96BA8 519 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 MALSU1Q96EH3 234 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 DIRAS2Q96HU8 199 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 AJUBAQ96IF1 538 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 YPEL2Q96QA6 119 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 MMP28Q9H239 520 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 PRDM13Q9H4Q3 707 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 DPM3Q9P2X0 92 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 SLC23A1Q9UHI7 598 aa13.79□□□□□ -0.2
FOXN4-203ENST00000423960 IGKV1D-8A0A087WSZ0 117 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 IGKV1-6A0A0C4DH72 117 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 MDFIC2A0A1B0GVS7 189 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 BUB1B-PAK6H3BSN5 160 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 HSPA12AO43301 675 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 TNFSF8P32971 234 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 CEACAM6P40199 344 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 IGSF11Q5DX21 431 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 LY6G6FQ5SQ64 297 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 LDLRAD2Q5SZI1 272 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 HOGA1Q86XE5 327 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 LINC00311Q8N616 119 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 GVQW1Q8N7I0 195 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 OR10X1Q8NGY0 326 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 SCPEP1Q9HB40 452 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 ZNRD1Q9P1U0 126 aa13.78□□□□□ -0.2
FOXN4-203ENST00000423960 AMMECR1Q9Y4X0 333 aaPredicted RBP13.78□□□□□ -0.2
FOXN4-203ENST00000423960 MEIS3P1A6NDR6 274 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 LEUTXA8MZ59 168 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 BET1O15155 118 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 DIRAS3O95661 229 aa13.77□□□□□ -0.21
FOXN4-203ENST00000423960 CTXN2P0C2S0 81 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms