RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 EBI3Q14213 229 aa14.18□□□□□ -0.14
SBDSP1-202ENST00000423945 GNMTQ14749 295 aa14.18□□□□□ -0.14
SBDSP1-202ENST00000423945 TRAT1Q6PIZ9 186 aa14.18□□□□□ -0.14
SBDSP1-202ENST00000423945 CD200R1LQ6Q8B3 271 aa14.18□□□□□ -0.14
SBDSP1-202ENST00000423945 RBMXL1Q96E39 390 aaKnown RBP14.18□□□□□ -0.14
SBDSP1-202ENST00000423945 AKR1E2Q96JD6 320 aa14.18□□□□□ -0.14
SBDSP1-202ENST00000423945 NEDD4LQ96PU5 975 aa14.18□□□□□ -0.14
SBDSP1-202ENST00000423945 CITED2Q99967 270 aaPredicted RBP14.18□□□□□ -0.14
SBDSP1-202ENST00000423945 IGHV3-72A0A0B4J1Y9 119 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 SOCS1O15524 211 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 NAPSAO96009 420 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 IGKV1D-33P01593 117 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 IGKV1-33P01594 117 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 GAPDHP04406 335 aaKnown RBP14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 ZNF137PP52743 207 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 PLA2G7Q13093 441 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 TMEM30BQ3MIR4 351 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 MORN2Q502X0 79 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 ARSJQ5FYB0 599 aaPredicted RBP14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 ZNF880Q6PDB4 577 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 C10orf99Q6UWK7 81 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 OR2W3Q7Z3T1 314 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 FAM89BQ8N5H3 189 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 OR51D1Q8NGF3 324 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 OR52L2PQ8NGH6 319 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 RTN4IP1Q8WWV3 396 aaPredicted RBP14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 PLGRKTQ9HBL7 147 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 NDUFB11Q9NX14 153 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 GNG12Q9UBI6 72 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 MOB4Q9Y3A3 225 aa14.17□□□□□ -0.14
SBDSP1-202ENST00000423945 H3BUI4 141 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 LDLRAD4O15165 306 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 PLXNB1O43157 2135 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 ARSBP15848 533 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 TMEM11P17152 192 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 BLVRBP30043 206 aaPredicted RBP14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 TMEM50BP56557 158 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 HNF4GQ14541 408 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 HMGN3Q15651 99 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 RAB11BQ15907 218 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 TCTEX1D4Q5JR98 221 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 UBE2UQ5VVX9 321 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 MOB3BQ86TA1 216 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 ZNF554Q86TJ5 538 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 SPARTQ8N0X7 666 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 SVOPQ8N4V2 548 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 Q8N6K4 173 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 C5orf56Q8N8D9 126 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 V9GY05 133 aa14.16□□□□□ -0.14
SBDSP1-202ENST00000423945 ZNF736B4DX44 427 aaPredicted RBP14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 MRPS14O60783 128 aaKnown RBP14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 OR10A3P58181 314 aa14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 CD83Q01151 205 aa14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 HES1Q14469 280 aa14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 NSUN5P1Q3KNT7 163 aa14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 IZUMO1Q8IYV9 350 aa14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 OR5AU1Q8NGC0 362 aa14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 FAM3DQ96BQ1 224 aa14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 EAF1Q96JC9 268 aaPredicted RBP14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 HDHD3Q9BSH5 251 aaPredicted RBP14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 RAB9BQ9NP90 201 aa14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 OR2S2Q9NQN1 319 aa14.15□□□□□ -0.14
SBDSP1-202ENST00000423945 TRAV1-2A0A0B4J238 106 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 TRDV1A0A1B0GX56 115 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 M0QZK8 103 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 PEX14O75381 377 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 PPP1CCP36873 323 aaKnown RBP14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 HTD2P86397 168 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 DEFA6Q01524 100 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 C2orf76Q3KRA6 126 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 HES5Q5TA89 166 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 NR2C2APQ86WQ0 139 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 NDUFA11Q86Y39 141 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 ODF3L1Q8IXM7 274 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 KCNIP1Q9NZI2 227 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 AK3Q9UIJ7 227 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 JPT1Q9UK76 154 aa14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 PRKDCP78527 4128 aaKnown RBP14.14□□□□□ -0.15
SBDSP1-202ENST00000423945 TMEM272A0A1B0GTI8 110 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 FGF16O43320 207 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 IL3RAP26951 378 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 CD1BP29016 333 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 VEGFCP49767 419 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 C9orf152Q5JTZ5 239 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 STEAP3Q658P3 488 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 URM1Q9BTM9 101 aaKnown RBP14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 PLSCR3Q9NRY6 295 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 PLEKHJ1Q9NW61 149 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 HSF4Q9ULV5 492 aa14.13□□□□□ -0.15
SBDSP1-202ENST00000423945 TRBV6-6A0A0A6YYG2 114 aa14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 YPEL1O60688 119 aa14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 OPN1MWP04001 364 aa14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 OPN1MW2P0DN77 364 aa14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 OPN1MW3P0DN78 364 aa14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 PLAC9Q5JTB6 97 aa14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 LY6G6FQ5SQ64 297 aa14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 C22orf42Q6IC83 251 aa14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 CENPVQ7Z7K6 275 aaPredicted RBP14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 TGIF2LXQ8IUE1 241 aa14.12□□□□□ -0.15
SBDSP1-202ENST00000423945 Q8N9W7 124 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms