RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 MGAT4AQ9UM21 535 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 SPATA2Q9UM82 520 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 KCNK7Q9Y2U2 307 aa12.75□□□□□ -0.37
BRAT1-202ENST00000421712 FAM181BA6NEQ2 426 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 SERPINE3A8MV23 424 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 NOL3O60936 208 aaKnown RBP12.74□□□□□ -0.37
BRAT1-202ENST00000421712 RORCP51449 518 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 LOXL3P58215 753 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 HMGN3Q15651 99 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 CTF1Q16619 201 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 DCSTAMPQ9H295 470 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 Q9N2K0 584 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 DIABLOQ9NR28 239 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 VPREB3Q9UKI3 123 aa12.74□□□□□ -0.37
BRAT1-202ENST00000421712 ATRQ13535 2644 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 TRBV6-6A0A0A6YYG2 114 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 MFNGO00587 321 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 GPR137BO60478 399 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 RGS11O94810 467 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 MNDAP41218 407 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 MADCAM1Q13477 382 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 AANATQ16613 207 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 TPTE2P1Q5T6R2 138 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 ZNF880Q6PDB4 577 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 IZUMO1Q8IYV9 350 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 COMMD3Q9UBI1 195 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 JPT1Q9UK76 154 aa12.73□□□□□ -0.37
BRAT1-202ENST00000421712 FBN1P35555 2871 aaKnown RBP12.72□□□□□ -0.37
BRAT1-202ENST00000421712 DNHD1Q96M86 4753 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 TRAV18A0A075B6X5 111 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 HSPA12AO43301 675 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 IL3RAP26951 378 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 BRS3P32247 399 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 PPP1CCP36873 323 aaKnown RBP12.72□□□□□ -0.37
BRAT1-202ENST00000421712 GNG2P59768 71 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 HLA-DRB3P79483 266 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 HTD2P86397 168 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 GNMTQ14749 295 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 MORN2Q502X0 79 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 DHRS7BQ6IAN0 325 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-202ENST00000421712 CCDC144NLQ6NUI1 221 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 SAMD12Q8N8I0 201 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 TAF15Q92804 592 aaKnown RBP eCLIP12.72□□□□□ -0.37
BRAT1-202ENST00000421712 KCTD12Q96CX2 325 aaKnown RBP12.72□□□□□ -0.37
BRAT1-202ENST00000421712 SLC25A38Q96DW6 304 aa12.72□□□□□ -0.37
BRAT1-202ENST00000421712 S100A16Q96FQ6 103 aaKnown RBP12.72□□□□□ -0.37
BRAT1-202ENST00000421712 ZNF230Q9UIE0 474 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-202ENST00000421712 ELF5Q9UKW6 265 aaPredicted RBP12.72□□□□□ -0.37
BRAT1-202ENST00000421712 TMEM235A6NFC5 223 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 POM121CA8CG34 1229 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 VGLL3A8MV65 326 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 TRDCB7Z8K6 153 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 FCGR3AP08637 254 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 GSTP1P09211 210 aaKnown RBP12.71□□□□□ -0.37
BRAT1-202ENST00000421712 SCTP09683 121 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 UBE2NLQ5JXB2 153 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 HACD4Q5VWC8 232 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 STEAP3Q658P3 488 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 Q6ZPA2 131 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 RAB2BQ8WUD1 216 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 MAFIPQ8WZ33 124 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 OCSTAMPQ9BR26 566 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 ST6GALNAC5Q9BVH7 336 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 SLC23A1Q9UHI7 598 aa12.71□□□□□ -0.37
BRAT1-202ENST00000421712 A0A0A6YYH2 397 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 A6NJ64 397 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 OOSP1A8MZH6 123 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 LY6LH3BQJ8 138 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 SLC31A2O15432 143 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 YPEL1O60688 119 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 GAPDHP04406 335 aaKnown RBP12.7□□□□□ -0.38
BRAT1-202ENST00000421712 LPLP06858 475 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 HKR1P10072 659 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 CD24P25063 80 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 CEACAM6P40199 344 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 KIR2DS4P43632 304 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 REG1BP48304 166 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 TMBIM6P55061 237 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 PITPNAQ00169 270 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 KIR2DS1Q14954 304 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 ZNF260Q3ZCT1 412 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 Q3ZCU0 254 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 CT45A1Q5HYN5 189 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 MZT2AQ6P582 158 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 C12orf54Q6X4T0 127 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 SLC25A48Q6ZT89 311 aaKnown RBP12.7□□□□□ -0.38
BRAT1-202ENST00000421712 MOB3BQ86TA1 216 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 LINC00311Q8N616 119 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 C8orf31Q8N9H6 132 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 DTX3Q8N9I9 347 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 OR2AK2Q8NG84 335 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 CT45A3Q8NHU0 189 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 PIFOQ8TCI5 191 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 ACOT12Q8WYK0 555 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 AP3S1Q92572 193 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 YPEL2Q96QA6 119 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 RAB18Q9NP72 206 aa12.7□□□□□ -0.38
BRAT1-202ENST00000421712 PITPNC1Q9UKF7 332 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms