RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 IGHV3-7P01780 117 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 IGHV3-43DP0DP04 118 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 GNB3P16520 340 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 SERPINB10P48595 397 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 ZNF137PP52743 207 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 HLA-DRB3P79483 266 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 RELBQ01201 579 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 GPR107Q5VW38 600 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 SPATA3Q8NHX4 192 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 KCTD12Q96CX2 325 aaKnown RBP15.02■□□□□ -0
PTCD3-204ENST00000418628 ATG5Q9H1Y0 275 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 MGAT4AQ9UM21 535 aa15.02■□□□□ -0
PTCD3-204ENST00000418628 AMMECR1Q9Y4X0 333 aaPredicted RBP15.02■□□□□ -0
PTCD3-204ENST00000418628 A0A0A6YYH2 397 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 A6NJ64 397 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 SLC31A2O15432 143 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 FCGR3AP08637 254 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 RPL5P46777 297 aaKnown RBP15.01□□□□□ -0.01
PTCD3-204ENST00000418628 GNG10P50151 68 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 ZNF134P52741 427 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 GNMTQ14749 295 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 ARL6IP1Q15041 203 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 ZNF260Q3ZCT1 412 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 MORN2Q502X0 79 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 LIAT1Q6ZQX7 453 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 Q6ZS49 121 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 ST6GALNAC6Q969X2 333 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 OCSTAMPQ9BR26 566 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 ABCG5Q9H222 651 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 CHMP1AQ9HD42 196 aaPredicted RBP15.01□□□□□ -0.01
PTCD3-204ENST00000418628 TCF19Q9Y242 345 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 HILPDAQ9Y5L2 63 aa15.01□□□□□ -0.01
PTCD3-204ENST00000418628 A0A1W2PPE3 182 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 A0A1W2PPI3 338 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 BTBD17A6NE02 478 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 CHST1O43916 411 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 YPEL1O60688 119 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 NDUFA7O95182 113 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 GSTP1P09211 210 aaKnown RBP15□□□□□ -0.01
PTCD3-204ENST00000418628 CEACAM3P40198 252 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 ACTG1P63261 375 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 HABP2Q14520 560 aaPredicted RBP15□□□□□ -0.01
PTCD3-204ENST00000418628 SRSF7Q16629 238 aaKnown RBP eCLIP15□□□□□ -0.01
PTCD3-204ENST00000418628 STEAP3Q658P3 488 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 CCBE1Q6UXH8 406 aaPredicted RBP15□□□□□ -0.01
PTCD3-204ENST00000418628 PRR18Q8N4B5 295 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 GALMQ96C23 342 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 YPEL2Q96QA6 119 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 BCL7BQ9BQE9 202 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 TNFRSF19Q9NS68 423 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 C1RLQ9NZP8 487 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 GNG12Q9UBI6 72 aa15□□□□□ -0.01
PTCD3-204ENST00000418628 ELF5Q9UKW6 265 aaPredicted RBP15□□□□□ -0.01
PTCD3-204ENST00000418628 IGKV1-6A0A0C4DH72 117 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 A6NDX4 124 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 DIRAS3O95661 229 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 CD3GP09693 182 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 ZNF816Q0VGE8 651 aaPredicted RBP14.99□□□□□ -0.01
PTCD3-204ENST00000418628 MADCAM1Q13477 382 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 DIAPH2-AS1Q14236 149 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 HERPUD1Q15011 391 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 PLA1AQ53H76 456 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 FBLN7Q53RD9 439 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 CT45A1Q5HYN5 189 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 OR52L2PQ8NGH6 319 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 OR10V1Q8NGI7 309 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 CT45A3Q8NHU0 189 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 CFHR4Q92496 578 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 CABLES2Q9BTV7 478 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 DCSTAMPQ9H295 470 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 OR2S2Q9NQN1 319 aa14.99□□□□□ -0.01
PTCD3-204ENST00000418628 FAM90A9PA6NNJ1 464 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 ITGB1BP1O14713 200 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 DTYMKP23919 212 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 PPP1CCP36873 323 aaKnown RBP14.98□□□□□ -0.01
PTCD3-204ENST00000418628 PNLIPRP3Q17RR3 467 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 UBE2NLQ5JXB2 153 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 HACD4Q5VWC8 232 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 CCDC144NLQ6NUI1 221 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 ODF3L1Q8IXM7 274 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 TAF15Q92804 592 aaKnown RBP eCLIP14.98□□□□□ -0.01
PTCD3-204ENST00000418628 TOMM40LQ969M1 308 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 TOLLIPQ9H0E2 274 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 MMP24Q9Y5R2 645 aa14.98□□□□□ -0.01
PTCD3-204ENST00000418628 A0A075B6Q4 140 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 TMEM235A6NFC5 223 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 HSD17B6O14756 317 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 SCTP09683 121 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 RAB7AP51149 207 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 RAB13P51153 203 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 TMBIM6P55061 237 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 LY6EQ16553 131 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 CDNFQ49AH0 187 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 OR8H3Q8N146 312 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 OR10X1Q8NGY0 326 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 SETD6Q8TBK2 473 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 RAB2BQ8WUD1 216 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 RPEQ96AT9 228 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 ABHD14AQ9BUJ0 271 aa14.97□□□□□ -0.01
PTCD3-204ENST00000418628 IFI27L2Q9H2X8 130 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms