RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 SLC25A32Q9H2D1 315 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 NARFLQ9H6Q4 476 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 TRBV23-1A0A0A0MS06 115 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 APOA2P02652 100 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 HEXAP06865 529 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 DAOP14920 347 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 P2RY1P47900 373 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 BLOC1S1P78537 153 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 RTL8BQ17RB0 113 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 PRR30Q53SZ7 412 aaPredicted RBP7.07□□□□□ -1.28
USP54-203ENST00000418501 CRIP3Q6Q6R5 217 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 MUC15Q8N387 334 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 OR52M1Q8NGK5 317 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 CNTNAP3BQ96NU0 1288 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 CNTNAP3Q9BZ76 1288 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 CCL28Q9NRJ3 127 aa7.07□□□□□ -1.28
USP54-203ENST00000418501 NCOA6Q14686 2063 aaPredicted RBP7.06□□□□□ -1.28
USP54-203ENST00000418501 IGHV3-64DA0A0J9YX35 117 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
USP54-203ENST00000418501 K7N7A8 449 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 CD80P33681 288 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 HBG1P69891 147 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 HBG2P69892 147 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 DEFB108BQ8NET1 73 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 CCL17Q92583 94 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 TMEM106BQ9NUM4 274 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 SLC25A10Q9UBX3 287 aaPredicted RBP7.06□□□□□ -1.28
USP54-203ENST00000418501 TNFSF18Q9UNG2 199 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 IGHV1-69-2A0A0G2JMI3 117 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 FAM90A26D6RGX4 464 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 CLDN1O95832 211 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 THBS3P49746 956 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 ADIPOQQ15848 244 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 Q6ZR03 302 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 SCGB1C1Q8TD33 95 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 TMEM56Q96MV1 263 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 BOLA1Q9Y3E2 137 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 AUP1Q9Y679 476 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 TMEM56-RWDD3S4R434 201 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 C3orf80F5H4A9 247 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 ADAM20O43506 726 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 PGLYRP1O75594 196 aaPredicted RBP7.06□□□□□ -1.28
USP54-203ENST00000418501 WNT2P09544 360 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 ANOS1P23352 680 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 UCP1P25874 307 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 HTR2BP41595 481 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 TEX261Q6UWH6 196 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 H2BFWTQ7Z2G1 175 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 WDR86Q86TI4 376 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 OR8B3Q8NGG8 313 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 PLPPR1Q8TBJ4 325 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 H1FXQ92522 213 aaKnown RBP7.06□□□□□ -1.28
USP54-203ENST00000418501 OR8B2Q96RD0 313 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 GSX2Q9BZM3 304 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 OR2D2Q9H210 308 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 CBLN4Q9NTU7 201 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 MIOXQ9UGB7 285 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 AMMECR1Q9Y4X0 333 aaPredicted RBP7.06□□□□□ -1.28
USP54-203ENST00000418501 POMT1Q9Y6A1 747 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 U3KQ87 197 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 SIGLEC5O15389 551 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 YPEL1O60688 119 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 RPL12P30050 165 aaKnown RBP7.06□□□□□ -1.28
USP54-203ENST00000418501 BAXQ07812 192 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 YPEL2Q96QA6 119 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 CALYQ9NYX4 217 aa7.06□□□□□ -1.28
USP54-203ENST00000418501 RCC1P18754 421 aaPredicted RBP7.05□□□□□ -1.28
USP54-203ENST00000418501 CCL8P80075 99 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 MRPS11P82912 194 aaKnown RBP7.05□□□□□ -1.28
USP54-203ENST00000418501 ZNF660Q6AZW8 331 aaPredicted RBP7.05□□□□□ -1.28
USP54-203ENST00000418501 TMEM230Q96A57 120 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 TSNAXQ99598 290 aaKnown RBP7.05□□□□□ -1.28
USP54-203ENST00000418501 FGF23Q9GZV9 251 aaPredicted RBP7.05□□□□□ -1.28
USP54-203ENST00000418501 GCM1Q9NP62 436 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 IDI2-AS1Q9NZ38 188 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 LINC00312Q9Y6C7 94 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 DBX1A6NMT0 343 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 HRASP01112 189 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 CAV2P51636 162 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 H2BFSP57053 126 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 ANKRD55Q3KP44 614 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 TEX36Q5VZQ5 186 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 ZNF680Q8NEM1 530 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.05□□□□□ -1.28
USP54-203ENST00000418501 C12orf77C9JDV5 145 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 F8VVB4 439 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 F8VWA3 439 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 WNT9BO14905 357 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 SSTR2P30874 369 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 PRRX1P54821 245 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 LGALSLQ3ZCW2 172 aaPredicted RBP7.05□□□□□ -1.28
USP54-203ENST00000418501 LY6G6FQ5SQ64 297 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 LRP11Q86VZ4 500 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 OR4A16Q8NH70 328 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 OR4S2Q8NH73 311 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 RNF141Q8WVD5 230 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 IL36RNQ9UBH0 155 aa7.05□□□□□ -1.28
USP54-203ENST00000418501 ZMAT5Q9UDW3 170 aaKnown RBP7.05□□□□□ -1.28
USP54-203ENST00000418501 IGKV1D-8A0A087WSZ0 117 aa7.04□□□□□ -1.28
USP54-203ENST00000418501 RAB29O14966 203 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms