RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ZSCAN4Q8NAM6 433 aaPredicted RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 ACBD4Q8NC06 268 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 CCDC54Q8NEL0 328 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 OR52R1Q8NGF1 315 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 OR5D14Q8NGL3 314 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 OR5H2Q8NGV7 314 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 OR4K15Q8NH41 348 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 KCNG3Q8TAE7 436 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 FNDC9Q8TBE3 224 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 SSC4DQ8WTU2 575 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 CASTOR1Q8WTX7 329 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 ING5Q8WYH8 240 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 MAFIPQ8WZ33 124 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 EMG1Q92979 244 aaKnown RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 C8orf44Q96CB5 159 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 NTNG2Q96CW9 530 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 ABHD14BQ96IU4 210 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 BMFQ96LC9 184 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 NOL4LQ96MY1 436 aaPredicted RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 VSTM2LQ96N03 204 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 RBM14Q96PK6 669 aaKnown RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 TSPAN32Q96QS1 320 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 OR2M4Q96R27 311 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 OR2A5Q96R48 311 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 TAAR6Q96RI8 345 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 CLCC1Q96S66 551 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 PYGO2Q9BRQ0 406 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 GINS3Q9BRX5 216 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 ADAT1Q9BUB4 502 aaKnown RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 RNF126Q9BV68 326 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 GGACTQ9BVM4 153 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 OCR1Q9BZK8 76 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 BCL2L14Q9BZR8 327 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 CHST5Q9GZS9 411 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 SLC35B3Q9H1N7 401 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 ARV1Q9H2C2 271 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 TXNIPQ9H3M7 391 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 SRMSQ9H3Y6 488 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 METTL8Q9H825 291 aaKnown RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 JPT2Q9H910 190 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 AKIRIN1Q9H9L7 192 aaPredicted RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 FN3KRPQ9HA64 309 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 GNB4Q9HAV0 340 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 ELOVL3Q9HB03 270 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 ZDHHC4Q9NPG8 344 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 UBQLN4Q9NRR5 601 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 TMEM242Q9NWH2 141 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 PLEK2Q9NYT0 353 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 TAS2R4Q9NYW5 299 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 B9D1Q9UPM9 204 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 C14orf166Q9Y224 244 aaKnown RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 KCNK6Q9Y257 313 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 CCL26Q9Y258 94 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 FARSAQ9Y285 508 aaKnown RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 KLHDC2Q9Y2U9 406 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 PCYT1BQ9Y5K3 369 aaPredicted RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 MMP24Q9Y5R2 645 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 R4GMQ9 66 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 SNRNP200O75643 2136 aaKnown RBP2.12□□□□□ -2.07
VPS41-206ENST00000418457 EML5Q05BV3 1969 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 FANCMQ8IYD8 2048 aa2.12□□□□□ -2.07
VPS41-206ENST00000418457 CPAMD8Q8IZJ3 1885 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 TET1Q8NFU7 2136 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 IGLV1-36A0A0B4J1U3 117 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 TRGV8A0A0C4DH27 118 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 TMEM269A0A1B0GVZ9 245 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 LOC107986453A0A1B0GWG9 222 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 PRSS37A4D1T9 235 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 OR5H15A6NDH6 313 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 TLCD2A6NGC4 264 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SRRM4A7MD48 611 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 SERPINE3A8MV23 424 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 TMEM14DPA8MWL7 114 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 H0YGG7 62 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 RPL36A-HNRNPH2H7BZ11 118 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 K7EQG2 157 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 DCTN6O00399 190 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 PPP1R2P9O14990 202 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 SLC31A2O15432 143 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CCL16O15467 120 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 RRP8O43159 456 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 TXNL1O43396 289 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 PPIHO43447 177 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 SLC16A7O60669 478 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ZNF354AO60765 605 aaPredicted RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 LRP3O75074 770 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 NDUFS6O75380 124 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 SRSF10O75494 262 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 DEDDO75618 318 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 ADAP1O75689 374 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CXCL14O95715 111 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 PTBP3O95758 552 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 TIMP1P01033 207 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 HBE1P02100 147 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 STATHP02808 62 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 BGLAPP02818 100 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 HSPB1P04792 205 aaKnown RBP2.11□□□□□ -2.07
VPS41-206ENST00000418457 SERPINA5P05154 406 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CSN2P05814 226 aa2.11□□□□□ -2.07
VPS41-206ENST00000418457 CTSDP07339 412 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms