RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 IFI6P09912 130 aa11.3□□□□□ -0.6
TNFRSF8-203ENST00000417814 SELENOHQ8IZQ5 122 aaKnown RBP11.3□□□□□ -0.6
TNFRSF8-203ENST00000417814 VKORC1L1Q8N0U8 176 aa11.3□□□□□ -0.6
TNFRSF8-203ENST00000417814 SPIN2AQ99865 258 aa11.3□□□□□ -0.6
TNFRSF8-203ENST00000417814 SPIN2BQ9BPZ2 258 aa11.3□□□□□ -0.6
TNFRSF8-203ENST00000417814 ATG101Q9BSB4 218 aa11.3□□□□□ -0.6
TNFRSF8-203ENST00000417814 RNF122Q9H9V4 155 aa11.3□□□□□ -0.6
TNFRSF8-203ENST00000417814 UCK1Q9HA47 277 aa11.3□□□□□ -0.6
TNFRSF8-203ENST00000417814 CLN3Q13286 438 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 MRGPRDQ8TDS7 321 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 APH1AQ96BI3 265 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 MISP3Q96FF7 219 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 ABHD14BQ96IU4 210 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 ATRXP46100 2492 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 OR6C6A6NF89 314 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 NUDT19A8MXV4 375 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 DVL1O14640 695 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 CYTIPO60759 359 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 FAM3BP58499 235 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 DHRS13Q6UX07 377 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 NUFIP2Q7Z417 695 aaKnown RBP11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 OR2Y1Q8NGV0 311 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 PROK2Q9HC23 129 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 TMED3Q9Y3Q3 217 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 V9GYS6 101 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 CLEC18AA5D8T8 446 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 GJE1A6NN92 205 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 IGLV3-19P01714 112 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 AESQ08117 197 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 ZNF610Q8N9Z0 462 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 CLEC18CQ8NCF0 446 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 LEAP2Q969E1 77 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 CLDN23Q96B33 292 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 TMEM222Q9H0R3 208 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 LOXL2Q9Y4K0 774 aa11.29□□□□□ -0.6
TNFRSF8-203ENST00000417814 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 OR3A1P47881 315 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 EDDM3BP56851 147 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 Q0VFX4 171 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 C10orf91Q5T1B1 145 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 DCAF12Q5T6F0 453 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 TIPARPQ7Z3E1 657 aaKnown RBP11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 KMT5CQ86Y97 462 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 MOB3AQ96BX8 217 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 FAM210BQ96KR6 192 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 OR2J1Q9GZK6 312 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 SH3BGRL2Q9UJC5 107 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 TCFL5Q9UL49 500 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 POMT1Q9Y6A1 747 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 PCP4P48539 62 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 HERPUD1Q15011 391 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 PATZ1Q9HBE1 687 aaKnown RBP11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 IL17BQ9UHF5 180 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 PGLYRP1O75594 196 aaPredicted RBP11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 IGHV2-5P01817 119 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 STARD6P59095 220 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 TLE4Q04727 773 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 ASPHD1Q5U4P2 390 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 REC114Q7Z4M0 266 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 ZDHHC16Q969W1 377 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 ADAMTS9Q9P2N4 1935 aa11.28□□□□□ -0.6
TNFRSF8-203ENST00000417814 PCBD1P61457 104 aa11.27□□□□□ -0.6
TNFRSF8-203ENST00000417814 EXT1Q16394 746 aa11.27□□□□□ -0.6
TNFRSF8-203ENST00000417814 OR52L2PQ8NGH6 319 aa11.27□□□□□ -0.6
TNFRSF8-203ENST00000417814 CT55Q8WUE5 264 aa11.27□□□□□ -0.6
TNFRSF8-203ENST00000417814 TMEM68Q96MH6 324 aa11.27□□□□□ -0.6
TNFRSF8-203ENST00000417814 ARRDC1-AS1Q9H2J1 176 aa11.27□□□□□ -0.6
TNFRSF8-203ENST00000417814 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 TRGC1P0CF51 173 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 SPCS3P61009 180 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 H3F3AP84243 136 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 SRSF4Q08170 494 aaKnown RBP11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 CUL9Q8IWT3 2517 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 A0A1B0GUS0 222 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 hCG_38984A0A1B0GV85 526 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 MBP02144 154 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 ARL16Q0P5N6 197 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 GCSAMLQ5JQS6 135 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 MRPL14Q6P1L8 145 aaKnown RBP11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 FAM58AQ8N1B3 248 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 NINJ1Q92982 152 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 ELOVL1Q9BW60 279 aa11.27□□□□□ -0.61
TNFRSF8-203ENST00000417814 IGKV1-6A0A0C4DH72 117 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 SLC35B1P78383 322 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 IL13RA2Q14627 380 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 OR8G1Q15617 311 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 OR1C1Q15619 314 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 ZNF66Q6ZN08 573 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 OR4C12Q96R67 309 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 ANGPTL4Q9BY76 406 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 RBKSQ9H477 322 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 MAP1LC3B2A6NCE7 125 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 VDAC1P21796 283 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 IL15RAQ13261 267 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 EIF3IQ13347 325 aaKnown RBP11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 PRAMEF6Q5VXH4 476 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 MRPL41Q8IXM3 137 aaKnown RBP11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 ZNF709Q8N972 641 aa11.26□□□□□ -0.61
TNFRSF8-203ENST00000417814 FADS6Q8N9I5 356 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms