RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 FAM71E2Q8N5Q1 922 aa17.09■□□□□ 0.33
ACTB-203ENST00000417101 TFAP2CQ92754 450 aa17.09■□□□□ 0.33
ACTB-203ENST00000417101 CYYR1Q96J86 154 aa17.09■□□□□ 0.33
ACTB-203ENST00000417101 UBE2QL1A1L167 161 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 ELANEP08246 267 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 SOX6P35712 828 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 CAPGP40121 348 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 CDX1P47902 265 aaPredicted RBP17.08■□□□□ 0.32
ACTB-203ENST00000417101 TAS2R43P59537 309 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 ADARB1P78563 741 aaKnown RBP17.08■□□□□ 0.32
ACTB-203ENST00000417101 DGCR2P98153 550 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 DHRSXQ8N5I4 330 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 RNF152Q8N8N0 203 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 Q96M66 194 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 DERL3Q96Q80 235 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 TAF9BQ9HBM6 251 aa17.08■□□□□ 0.32
ACTB-203ENST00000417101 ZMAT5Q9UDW3 170 aaKnown RBP17.08■□□□□ 0.32
ACTB-203ENST00000417101 FAM90A10PA6NDY2 464 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 EFCAB10A6NFE3 127 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 FAM90A7PA6NKC0 464 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 FAM90A23PA8MXZ1 464 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 CA11O75493 328 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 SC5DO75845 299 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 CELP19835 753 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 FUT3P21217 361 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 VDAC1P21796 283 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 GP2P55259 537 aaKnown RBP17.07■□□□□ 0.32
ACTB-203ENST00000417101 CFHR3Q02985 330 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 KIR2DS1Q14954 304 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 STEAP3Q658P3 488 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 SIGIRRQ6IA17 410 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 LYPD6Q86Y78 171 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 OR8U1Q8NH10 309 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 OR2S2Q9NQN1 319 aa17.07■□□□□ 0.32
ACTB-203ENST00000417101 LANCL1O43813 399 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 IGHG4P01861 327 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 GLAP06280 429 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 MYF6P23409 242 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 LUMP51884 338 aaPredicted RBP17.06■□□□□ 0.32
ACTB-203ENST00000417101 LSAMPQ13449 338 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 DCTN2Q13561 401 aaKnown RBP17.06■□□□□ 0.32
ACTB-203ENST00000417101 DOC2BQ14184 412 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 GNMTQ14749 295 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 C5orf24Q7Z6I8 188 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 PACRGLQ8N7B6 248 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 OR5M8Q8NGP6 311 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 FAM46BQ96A09 425 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.06■□□□□ 0.32
ACTB-203ENST00000417101 MBNL3Q9NUK0 354 aaKnown RBP17.06■□□□□ 0.32
ACTB-203ENST00000417101 KCNIP1Q9NZI2 227 aa17.06■□□□□ 0.32
ACTB-203ENST00000417101 SLC2A2P11168 524 aaPredicted RBP17.05■□□□□ 0.32
ACTB-203ENST00000417101 MMDQ15546 238 aa17.05■□□□□ 0.32
ACTB-203ENST00000417101 MORN2Q502X0 79 aa17.05■□□□□ 0.32
ACTB-203ENST00000417101 OR52L2PQ8NGH6 319 aa17.05■□□□□ 0.32
ACTB-203ENST00000417101 KCTD7Q96MP8 289 aa17.05■□□□□ 0.32
ACTB-203ENST00000417101 CNOT2Q9NZN8 540 aaKnown RBP17.05■□□□□ 0.32
ACTB-203ENST00000417101 ZNF107Q9UII5 783 aaPredicted RBP17.05■□□□□ 0.32
ACTB-203ENST00000417101 MYL12BO14950 172 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 PDCD6O75340 191 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 IGF1P05019 195 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 GNAO1P09471 354 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 PPP1CCP36873 323 aaKnown RBP17.04■□□□□ 0.32
ACTB-203ENST00000417101 WNT4P56705 351 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 LAIR2Q6ISS4 152 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 AHSA2Q719I0 299 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 NKAIN3Q8N8D7 197 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 UQCC2Q9BRT2 126 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 ABHD14AQ9BUJ0 271 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 C8orf4Q9NR00 106 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 PSORS1C1Q9UIG5 152 aa17.04■□□□□ 0.32
ACTB-203ENST00000417101 RAMP3O60896 148 aa17.03■□□□□ 0.32
ACTB-203ENST00000417101 CD1AP06126 327 aa17.03■□□□□ 0.32
ACTB-203ENST00000417101 OR5H8P0DN80 308 aa17.03■□□□□ 0.32
ACTB-203ENST00000417101 PSMB8P28062 276 aa17.03■□□□□ 0.32
ACTB-203ENST00000417101 NKAPLQ5M9Q1 402 aa17.03■□□□□ 0.32
ACTB-203ENST00000417101 C8orf59Q8N0T1 100 aaPredicted RBP17.03■□□□□ 0.32
ACTB-203ENST00000417101 MRPL30Q8TCC3 161 aaKnown RBP17.03■□□□□ 0.32
ACTB-203ENST00000417101 C4orf3Q8WVX3 66 aa17.03■□□□□ 0.32
ACTB-203ENST00000417101 MRPL20Q9BYC9 149 aaKnown RBP17.03■□□□□ 0.32
ACTB-203ENST00000417101 JPT1Q9UK76 154 aa17.03■□□□□ 0.32
ACTB-203ENST00000417101 MAPK3P27361 379 aaPredicted RBP17.02■□□□□ 0.32
ACTB-203ENST00000417101 C9orf66Q5T8R8 295 aa17.02■□□□□ 0.32
ACTB-203ENST00000417101 ZNF554Q86TJ5 538 aa17.02■□□□□ 0.32
ACTB-203ENST00000417101 BPIFB6Q8NFQ5 453 aa17.02■□□□□ 0.32
ACTB-203ENST00000417101 THRSPQ92748 146 aa17.02■□□□□ 0.32
ACTB-203ENST00000417101 RITA1Q96K30 269 aa17.02■□□□□ 0.32
ACTB-203ENST00000417101 CST11Q9H112 138 aa17.02■□□□□ 0.32
ACTB-203ENST00000417101 GHRLQ9UBU3 117 aa17.02■□□□□ 0.32
ACTB-203ENST00000417101 ZNF580Q9UK33 172 aa17.02■□□□□ 0.32
ACTB-203ENST00000417101 WSB1Q9Y6I7 421 aa17.02■□□□□ 0.32
ACTB-203ENST00000417101 SEC14L6B5MCN3 397 aa17.01■□□□□ 0.31
ACTB-203ENST00000417101 CNTFRP26992 372 aa17.01■□□□□ 0.31
ACTB-203ENST00000417101 ACTBP60709 375 aa17.01■□□□□ 0.31
ACTB-203ENST00000417101 HTD2P86397 168 aa17.01■□□□□ 0.31
ACTB-203ENST00000417101 INSL4Q14641 139 aa17.01■□□□□ 0.31
ACTB-203ENST00000417101 ODF3L1Q8IXM7 274 aa17.01■□□□□ 0.31
ACTB-203ENST00000417101 NANOGP1Q8N7R0 232 aa17.01■□□□□ 0.31
ACTB-203ENST00000417101 WWC2-AS2Q96NR7 200 aa17.01■□□□□ 0.31
ACTB-203ENST00000417101 PRR25Q96S07 402 aa17.01■□□□□ 0.31
ACTB-203ENST00000417101 NABP2Q9BQ15 211 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms