RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TMEM138Q9NPI0 162 aa11.88□□□□□ -0.51
DDX56-202ENST00000415758 ERVK13-1Q9NX77 482 aa11.88□□□□□ -0.51
DDX56-202ENST00000415758 RCC2Q9P258 522 aaKnown RBP11.88□□□□□ -0.51
DDX56-202ENST00000415758 GNG12Q9UBI6 72 aa11.88□□□□□ -0.51
DDX56-202ENST00000415758 MRPS28Q9Y2Q9 187 aaKnown RBP11.88□□□□□ -0.51
DDX56-202ENST00000415758 FADS2O95864 444 aaKnown RBP11.87□□□□□ -0.51
DDX56-202ENST00000415758 HBZP02008 142 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 ALPLP05186 524 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 CD2P06729 351 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 OR8U9P0C7N5 309 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 GTF2F2P13984 249 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 GABRB1P18505 474 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 SERPINA2P20848 420 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 ZNF93P35789 620 aaPredicted RBP11.87□□□□□ -0.51
DDX56-202ENST00000415758 SOX2P48431 317 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 CRIP2P52943 208 aaPredicted RBP11.87□□□□□ -0.51
DDX56-202ENST00000415758 GBX2P52951 348 aaPredicted RBP11.87□□□□□ -0.51
DDX56-202ENST00000415758 SLURP1P55000 103 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 MORN2Q502X0 79 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 LIN54Q6MZP7 749 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 Q8N1Y9 231 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 NPBQ8NG41 125 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 GPR148Q8TDV2 347 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 NEK7Q8TDX7 302 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 ISOC1Q96CN7 298 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 S100A13Q99584 98 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 ANKRD60Q9BZ19 345 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 ALX4Q9H161 411 aaPredicted RBP11.87□□□□□ -0.51
DDX56-202ENST00000415758 SPACA1Q9HBV2 294 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 PARP11Q9NR21 331 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 C19orf73Q9NVV2 129 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 NKX1-2Q9UD57 310 aaPredicted RBP11.87□□□□□ -0.51
DDX56-202ENST00000415758 TRAPPC2LQ9UL33 140 aa11.87□□□□□ -0.51
DDX56-202ENST00000415758 NBR2O15453 112 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 SOX15O60248 233 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 NDUFA3O95167 84 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 LGALS1P09382 135 aaKnown RBP11.86□□□□□ -0.51
DDX56-202ENST00000415758 IGHV4-30-4P0DP06 118 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 CNTFRP26992 372 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 BLVRBP30043 206 aaPredicted RBP11.86□□□□□ -0.51
DDX56-202ENST00000415758 C5orf64Q2M2E5 130 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 C6orf183Q5T699 404 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 TRAT1Q6PIZ9 186 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 LYPD6Q86Y78 171 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 ODF3L1Q8IXM7 274 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 OR10V1Q8NGI7 309 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 ARPC1AQ92747 370 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 TMEM106AQ96A25 262 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 ZNF251Q9BRH9 671 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 ERGIC3Q9Y282 383 aa11.86□□□□□ -0.51
DDX56-202ENST00000415758 A0A1W2PP11 408 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 MCRIP1C9JLW8 97 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 CA11O75493 328 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 GTF2A1P52655 376 aaPredicted RBP11.85□□□□□ -0.51
DDX56-202ENST00000415758 PPP3R1P63098 170 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 RAB40BQ12829 278 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 GPR176Q14439 515 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 CCDC58Q4VC31 144 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 DDI2Q5TDH0 399 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 ZNF554Q86TJ5 538 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 TCTEX1D1Q8N7M0 179 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 OR4K15Q8NH41 348 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 OR1L1Q8NH94 360 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 MRPS24Q96EL2 167 aaKnown RBP11.85□□□□□ -0.51
DDX56-202ENST00000415758 NABP2Q9BQ15 211 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 CST11Q9H112 138 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 OR2S2Q9NQN1 319 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 MRPS18AQ9NVS2 196 aaKnown RBP11.85□□□□□ -0.51
DDX56-202ENST00000415758 AASSQ9UDR5 926 aa11.85□□□□□ -0.51
DDX56-202ENST00000415758 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 A0A087WW49 117 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 SAC3D1A6NKF1 404 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 ARPC1BO15143 372 aaKnown RBP11.84□□□□□ -0.51
DDX56-202ENST00000415758 SC5DO75845 299 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 HSPB1P04792 205 aaKnown RBP11.84□□□□□ -0.51
DDX56-202ENST00000415758 RCC1P18754 421 aaPredicted RBP11.84□□□□□ -0.51
DDX56-202ENST00000415758 BDKRB2P30411 391 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 ADARB1P78563 741 aaKnown RBP11.84□□□□□ -0.51
DDX56-202ENST00000415758 SRSF7Q16629 238 aaKnown RBP eCLIP11.84□□□□□ -0.51
DDX56-202ENST00000415758 SLC22A6Q4U2R8 563 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 LY6G6FQ5SQ64 297 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 ZNF660Q6AZW8 331 aaPredicted RBP11.84□□□□□ -0.51
DDX56-202ENST00000415758 RPL22L1Q6P5R6 122 aaKnown RBP11.84□□□□□ -0.51
DDX56-202ENST00000415758 PRR18Q8N4B5 295 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 FLYWCH2Q96CP2 140 aaKnown RBP11.84□□□□□ -0.51
DDX56-202ENST00000415758 OR4C12Q96R67 309 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 MBNL3Q9NUK0 354 aaKnown RBP11.84□□□□□ -0.51
DDX56-202ENST00000415758 ETAA1Q9NY74 926 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 FOXA2Q9Y261 457 aaPredicted RBP11.84□□□□□ -0.51
DDX56-202ENST00000415758 FBXO7Q9Y3I1 522 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 ORC6Q9Y5N6 252 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 NUBP2Q9Y5Y2 271 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 HYDINQ4G0P3 5121 aa11.84□□□□□ -0.51
DDX56-202ENST00000415758 A0A1W2PN81 502 aa11.83□□□□□ -0.52
DDX56-202ENST00000415758 HSPA12AO43301 675 aa11.83□□□□□ -0.52
DDX56-202ENST00000415758 GPX5O75715 221 aa11.83□□□□□ -0.52
DDX56-202ENST00000415758 IGLV1-51P01701 117 aa11.83□□□□□ -0.52
DDX56-202ENST00000415758 GLAP06280 429 aa11.83□□□□□ -0.52
DDX56-202ENST00000415758 IGFBP3P17936 291 aaPredicted RBP11.83□□□□□ -0.52
DDX56-202ENST00000415758 CHRNA7P36544 502 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms