RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PPP1R1CQ8WVI7 109 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 PSMG3-AS1Q96PY0 264 aa13.02□□□□□ -0.33
SHMT2-202ENST00000414700 RCC2Q9P258 522 aaKnown RBP13.02□□□□□ -0.33
SHMT2-202ENST00000414700 NDUFS7O75251 213 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 CFHR2P36980 270 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 TAS2R19P59542 299 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 TLE4Q04727 773 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 DHRS2Q13268 280 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 ZNF260Q3ZCT1 412 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 CDNFQ49AH0 187 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 HIST2H2BCQ6DN03 193 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 ACP7Q6ZNF0 438 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 Q8IYB0 196 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 OR5AP2Q8NGF4 316 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 OR56B1Q8NGI3 324 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 CCL17Q92583 94 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 RAB3CQ96E17 227 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 LIME1Q9H400 295 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 IGHV3OR15-7A0A075B7D8 119 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 TRBV23-1A0A0A0MS06 115 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 GOSR1O95249 250 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 RAB3DO95716 219 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 CHRM2P08172 466 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 HLA-GP17693 338 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 TMEM229BQ8NBD8 167 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 Q8TCH9 128 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 DYRK2Q92630 601 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 NRGNQ92686 78 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 TMEM231Q9H6L2 316 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 OR14J1Q9UGF5 321 aa13.01□□□□□ -0.33
SHMT2-202ENST00000414700 A0A0A6YYH2 397 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 MEIS3P1A6NDR6 274 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 A6NJ64 397 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 HSPB6O14558 160 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 CD74P04233 296 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 HIST1H1DP16402 221 aaKnown RBP13□□□□□ -0.33
SHMT2-202ENST00000414700 CD80P33681 288 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 ATPAF1Q5TC12 328 aaPredicted RBP13□□□□□ -0.33
SHMT2-202ENST00000414700 ZNF561Q8N587 486 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 GPX8Q8TED1 209 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 RNF7Q9UBF6 113 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 HECTD1Q9ULT8 2610 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 KIAA2026Q5HYC2 2103 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 ANKRD17O75179 2603 aaKnown RBP13□□□□□ -0.33
SHMT2-202ENST00000414700 MFNGO00587 321 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 CCSO14618 274 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 ZNF44P15621 663 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 COL8A2P25067 703 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 CHATP28329 748 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 PNLIPRP3Q17RR3 467 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 NUDCD2Q8WVJ2 157 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 ERGIC1Q969X5 290 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 C14orf79Q96F83 325 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 SULT4A1Q9BR01 284 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 FAAP24Q9BTP7 215 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 PECRQ9BY49 303 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 PLEKHJ1Q9NW61 149 aa13□□□□□ -0.33
SHMT2-202ENST00000414700 IGHV1-69-2A0A0G2JMI3 117 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 ZNF705EA8MWA4 302 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-202ENST00000414700 RCC1P18754 421 aaPredicted RBP12.99□□□□□ -0.33
SHMT2-202ENST00000414700 PPT1P50897 306 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 FABP9Q0Z7S8 132 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 ZNF146Q15072 292 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 Q6P435 159 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 BAP18Q8IXM2 172 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 BPIFB2Q8N4F0 458 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 HIST1H2BAQ96A08 127 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 SEC22AQ96IW7 307 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 RHOFQ9HBH0 211 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 TMEM106BQ9NUM4 274 aa12.99□□□□□ -0.33
SHMT2-202ENST00000414700 TRAV24A0A0B4J272 114 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 TEX13DA0A0J9YY54 714 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-202ENST00000414700 ZNF729A6NN14 1252 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-202ENST00000414700 OR2H2O95918 312 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 HLA-AP01891 365 aaKnown RBP12.98□□□□□ -0.33
SHMT2-202ENST00000414700 SMIM21Q3B7S5 101 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 DEFB108BQ8NET1 73 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 TCTEX1D2Q8WW35 142 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 IGFBPL1Q8WX77 278 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 RDH5Q92781 318 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 NUDT16L1Q9BRJ7 211 aaKnown RBP12.98□□□□□ -0.33
SHMT2-202ENST00000414700 HDHD3Q9BSH5 251 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-202ENST00000414700 RAB1BQ9H0U4 201 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 METRNQ9UJH8 293 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 DMRT1Q9Y5R6 373 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 IGKV1D-17A0A075B6S4 117 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 TMEM178BH3BS89 294 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 SIRPB1O00241 398 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 PDCD6O75340 191 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 SCGNO76038 276 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 AMY2AP04746 511 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 PSG2P11465 335 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 MUC1P15941 1255 aaPredicted RBP12.98□□□□□ -0.33
SHMT2-202ENST00000414700 FAM189A2Q15884 450 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 MPV17LQ2QL34 196 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 Q3ZCU0 254 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 FAM90A1Q86YD7 464 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 OR11L1Q8NGX0 322 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 DNAJB11Q9UBS4 358 aa12.98□□□□□ -0.33
SHMT2-202ENST00000414700 TXNL1O43396 289 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms