RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 SLC33A1O00400 549 aaPredicted RBP3.96□□□□□ -1.78
VPS41-205ENST00000414632 DEGS1O15121 323 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 IGHV1-69P01742 117 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 IGFBP3P17936 291 aaPredicted RBP3.96□□□□□ -1.78
VPS41-205ENST00000414632 TGFBR2P37173 567 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 GLIPR1P48060 266 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 BMXP51813 675 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 HILS1P60008 231 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 UBA52P62987 128 aaKnown RBP3.96□□□□□ -1.78
VPS41-205ENST00000414632 ACTG1P63261 375 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 AESQ08117 197 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 SCGB2A2Q13296 93 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 SLC22A6Q4U2R8 563 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 ACSM3Q53FZ2 586 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 RBM48Q5RL73 367 aaKnown RBP3.96□□□□□ -1.78
VPS41-205ENST00000414632 DHRS7BQ6IAN0 325 aaPredicted RBP3.96□□□□□ -1.78
VPS41-205ENST00000414632 HCP5Q6MZN7 132 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 Q6P435 159 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 PET117Q6UWS5 81 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 BAIAP2L2Q6UXY1 529 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 RBMS3Q6XE24 437 aaKnown RBP3.96□□□□□ -1.78
VPS41-205ENST00000414632 SLC16A12Q6ZSM3 486 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 TCF23Q7RTU1 214 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 PRSS48Q7RTY5 328 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 CEACAM19Q7Z692 300 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 TRAPPC6BQ86SZ2 158 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 Q8IYB0 196 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 KIR3DL3Q8N743 410 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 OR4D6Q8NGJ1 314 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 C8orf46Q8TAG6 207 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 SETD6Q8TBK2 473 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 C17orf50Q8WW18 174 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 TMEM158Q8WZ71 300 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 UFD1Q92890 307 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 TNFRSF14Q92956 283 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 FAM46BQ96A09 425 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 TMEM138Q9NPI0 162 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 CKLFQ9UBR5 152 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 MRPS28Q9Y2Q9 187 aaKnown RBP3.96□□□□□ -1.78
VPS41-205ENST00000414632 KPTNQ9Y664 436 aa3.96□□□□□ -1.78
VPS41-205ENST00000414632 CMYA5Q8N3K9 4069 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 TRAV24A0A0B4J272 114 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 SMIM30A4D0T7 59 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 TRIM77I1YAP6 450 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 M0QZ24 198 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 M0R1W7 72 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 SH2D1BO14796 132 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 GEMIN2O14893 280 aaKnown RBP3.95□□□□□ -1.78
VPS41-205ENST00000414632 NPFFO15130 113 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 DENRO43583 198 aaKnown RBP3.95□□□□□ -1.78
VPS41-205ENST00000414632 MMP23AO75900 390 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 IGHV4-59P01825 116 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 ALDOBP05062 364 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 MELTFP08582 738 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 ZNF728P0DKX0 622 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 OMGP23515 440 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 SAA4P35542 130 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 PTGFRP43088 359 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 DLX6P56179 175 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 P2RX3P56373 397 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 PROK1P58294 105 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 FABP5Q01469 135 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 BDH1Q02338 343 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 ACSM1Q08AH1 577 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 MLLT11Q13015 90 aaPredicted RBP3.95□□□□□ -1.78
VPS41-205ENST00000414632 ZNF146Q15072 292 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 SLC9A3R2Q15599 337 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 SSX1Q16384 188 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 LY6EQ16553 131 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 TAF9Q16594 264 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 LTC4SQ16873 150 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 HSD17B12Q53GQ0 312 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 PAN3Q58A45 887 aaKnown RBP3.95□□□□□ -1.78
VPS41-205ENST00000414632 SPIN3Q5JUX0 258 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 UTF1Q5T230 341 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 ATAD3CQ5T2N8 411 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 PRAMEF5Q5TYX0 476 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 RNLSQ5VYX0 342 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 AWAT2Q6E213 333 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 OR10K2Q6IF99 312 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 TEX38Q6PEX7 206 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 C11orf88Q6PI97 169 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 GLIPR1L1Q6UWM5 242 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 TMEM91Q6ZNR0 172 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 LHFPL4Q7Z7J7 247 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 LRRTM1Q86UE6 522 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 CCDC190Q86UF4 302 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 RTN4RL2Q86UN3 420 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 LDLRAD3Q86YD5 345 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 SAXO1Q8IYX7 474 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 OSR2Q8N2R0 312 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 C11orf42Q8N5U0 333 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 ZSCAN4Q8NAM6 433 aaPredicted RBP3.95□□□□□ -1.78
VPS41-205ENST00000414632 TMEM104Q8NE00 496 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 PXT1Q8NFP0 134 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 UBALD1Q8TB05 177 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 PLPPR1Q8TBJ4 325 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 NEK7Q8TDX7 302 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 CCDC107Q8WV48 283 aa3.95□□□□□ -1.78
VPS41-205ENST00000414632 DYRK2Q92630 601 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms