RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SIGLEC7Q9Y286 467 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 YTHDF2Q9Y5A9 579 aaKnown RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 IER3IP1Q9Y5U9 82 aa2.99□□□□□ -1.93
SF3B1-203ENST00000414174 DICER1Q9UPY3 1922 aaKnown RBP2.99□□□□□ -1.93
SF3B1-203ENST00000414174 PHIPQ8WWQ0 1821 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TEX50A0A1B0GTY4 177 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 LOC102725191A0A1B0GVB3 256 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 FAM240AA0A1B0GVK7 77 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 A1L4Q6 167 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 MYBPHLA2RUH7 354 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM212A6NML5 194 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF705EA8MWA4 302 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 SMKR1H3BMG3 65 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 K7EPK0 472 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TNFSF13O75888 250 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZFAND5O76080 213 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 NDUFC2O95298 119 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 GPX1P07203 203 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 IGLC1P0CG04 106 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 NHLRC4P0CG21 123 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF728P0DKX0 622 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 OR12D1P0DN82 309 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TFPIP10646 304 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ERGP11308 486 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 MYOD1P15172 320 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 MARCKSL1P49006 195 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TAF6P49848 677 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 FABP6P51161 128 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 BACE1P56817 501 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 UBE2NP61088 152 aaKnown RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 RND3P61587 244 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 SUMO2P61956 95 aaKnown RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 RPS13P62277 151 aaKnown RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 UBA52P62987 128 aaKnown RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 SLC25A11Q02978 314 aaKnown RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ARL16Q0P5N6 197 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM267Q0VDI3 215 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 LAGE3Q14657 143 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 LRRC10Q5BKY1 277 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 SPANXN3Q5MJ09 141 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF684Q5T5D7 378 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 RASL11AQ6T310 242 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 IGFL2Q6UWQ7 119 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 STAC2Q6ZMT1 411 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF705AQ6ZN79 300 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF550Q7Z398 422 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 PIP4P1Q86T03 277 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 CDC20BQ86Y33 519 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TGIF2LYQ8IUE0 185 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 C11orf53Q8IXP5 236 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TTC9CQ8N5M4 171 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 FAM71E2Q8N5Q1 922 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 RBMXL3Q8N7X1 1067 aaKnown RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 LRTM2Q8N967 370 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 OR4F17Q8NGA8 305 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 OR52R1Q8NGF1 315 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 MFSD8Q8NHS3 518 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 JOSD2Q8TAC2 188 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 FGFBP3Q8TAT2 258 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 FNDC9Q8TBE3 224 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 C15orf40Q8WUR7 153 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZNRF4Q8WWF5 429 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 SRSF12Q8WXF0 261 aaKnown RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM54Q969K7 222 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 TMEM18Q96B42 140 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ADAT3Q96EY9 351 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 DYNLL2Q96FJ2 89 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 C9orf85Q96MD7 179 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 MS4A4EQ96PG1 132 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 OR4F4Q96R69 305 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 PRR25Q96S07 402 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 PLEKHF1Q96S99 279 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 MRPL45Q9BRJ2 306 aaKnown RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 SPANXDQ9BXN6 97 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ARRDC1-AS1Q9H2J1 176 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 R3HDMLQ9H3Y0 253 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ACKR4Q9NPB9 350 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 MEPEQ9NQ76 525 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZNF586Q9NXT0 402 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 BET1LQ9NYM9 111 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 EHFQ9NZC4 300 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 RIMS3Q9UJD0 308 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 FLVCR1Q9Y5Y0 555 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZMYM4Q5VZL5 1548 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 LRRC7Q96NW7 1537 aa2.98□□□□□ -1.93
SF3B1-203ENST00000414174 ZC3H13Q5T200 1668 aaKnown RBP2.98□□□□□ -1.93
SF3B1-203ENST00000414174 KIF14Q15058 1648 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 PREX2Q70Z35 1606 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 CC2D2AQ9P2K1 1620 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 ERVK-7P63135 1459 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 PLA2R1Q13018 1463 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 BCORL1Q5H9F3 1711 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 FRMPD1Q5SYB0 1578 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 PRG4Q92954 1404 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 LOC102724200A0A096LPH7 203 aaPredicted RBP2.97□□□□□ -1.93
SF3B1-203ENST00000414174 TRAV5A0A0B4J249 113 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 A0A0B4J2A0 478 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 A0A1W2PP11 408 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 DHRS12A0PJE2 317 aa2.97□□□□□ -1.93
SF3B1-203ENST00000414174 A6NDN8 102 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms