RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ZNF497Q6ZNH5 498 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 Q6ZR03 302 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 SCARB1Q8WTV0 552 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 RDH5Q92781 318 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 MUCL1Q96DR8 90 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 GLS2Q9UI32 602 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 KIF25Q9UIL4 384 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 PCDHB10Q9UN67 800 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 LAMP3Q9UQV4 416 aa14.33□□□□□ -0.12
PTPRC-206ENST00000413409 PRR14LQ5THK1 2151 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 ANKRD34BA5PLL1 514 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 OVOL3O00110 214 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 HSPB6O14558 160 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 PTBP3O95758 552 aaKnown RBP14.32□□□□□ -0.12
PTPRC-206ENST00000413409 THBDP07204 575 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 SCTP09683 121 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 ZNF250P15622 560 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 CD200P41217 278 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 KCNJ3P48549 501 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 ZNF83P51522 516 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 RPS23P62266 143 aaKnown RBP14.32□□□□□ -0.12
PTPRC-206ENST00000413409 ESCO2Q56NI9 601 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 LIAT1Q6ZQX7 453 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 SSX8Q7RTT4 187 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 INO80EQ8NBZ0 244 aaPredicted RBP14.32□□□□□ -0.12
PTPRC-206ENST00000413409 OR5T2Q8NGG2 359 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 TMEM165Q9HC07 324 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 PRR13Q9NZ81 148 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 DNAJB11Q9UBS4 358 aa14.32□□□□□ -0.12
PTPRC-206ENST00000413409 IGKV1-6A0A0C4DH72 117 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.31□□□□□ -0.12
PTPRC-206ENST00000413409 HS3ST1O14792 307 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 HAND1O96004 215 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 CRYAAP02489 173 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 GRPP07492 148 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 HOXB5P09067 269 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 OR5AC1P0C628 307 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 GLRXP35754 106 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 AP2S1P53680 142 aaPredicted RBP14.31□□□□□ -0.12
PTPRC-206ENST00000413409 LDLRAD3Q86YD5 345 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 C11orf53Q8IXP5 236 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 LGI3Q8N145 548 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 DCUN1D4Q92564 292 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 OR10C1Q96KK4 312 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 ELOVL5Q9NYP7 299 aa14.31□□□□□ -0.12
PTPRC-206ENST00000413409 FBXO9Q9UK97 447 aaPredicted RBP14.31□□□□□ -0.12
PTPRC-206ENST00000413409 A0A096LNT2 108 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 M0R1B8 84 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 SIRPB1O00241 398 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 GPR31O00270 319 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 BET1O15155 118 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 ZNF205O95201 554 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 IGHV3-13P01766 116 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 WNT2P09544 360 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 LMO1P25800 156 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 PHLDA2Q53GA4 152 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 GGNBP1Q5YKI7 109 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 ZNF565Q8N9K5 539 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 OR10Z1Q8NGY1 313 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 MSI2Q96DH6 328 aaKnown RBP14.3□□□□□ -0.12
PTPRC-206ENST00000413409 RNF126Q9BV68 326 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 SEBOXQ9HB31 216 aaPredicted RBP14.3□□□□□ -0.12
PTPRC-206ENST00000413409 MBNL3Q9NUK0 354 aaKnown RBP14.3□□□□□ -0.12
PTPRC-206ENST00000413409 TMEM160Q9NX00 188 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 WIPI2Q9Y4P8 454 aa14.3□□□□□ -0.12
PTPRC-206ENST00000413409 A6NLC8 198 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 H0YIZ8 118 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 C16orf97H3BN30 126 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 NDUFS7O75251 213 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 IGHV4-39P01824 125 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 NUP62P37198 522 aaPredicted RBP14.29□□□□□ -0.12
PTPRC-206ENST00000413409 FABP6P51161 128 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 ATXN7L3Q14CW9 347 aaPredicted RBP14.29□□□□□ -0.12
PTPRC-206ENST00000413409 HMGN3Q15651 99 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 IAH1Q2TAA2 248 aaPredicted RBP14.29□□□□□ -0.12
PTPRC-206ENST00000413409 SMIM21Q3B7S5 101 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 WDR82Q6UXN9 313 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 ACP7Q6ZNF0 438 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 H1FOOQ8IZA3 346 aaPredicted RBP14.29□□□□□ -0.12
PTPRC-206ENST00000413409 PLPPR1Q8TBJ4 325 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 ST8SIA2Q92186 375 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 MRPL24Q96A35 216 aaKnown RBP14.29□□□□□ -0.12
PTPRC-206ENST00000413409 PHYHIPLQ96FC7 376 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 KIRREL1Q96J84 757 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 ARPC5LQ9BPX5 153 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 TMEM204Q9BSN7 226 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 SLC5A7Q9GZV3 580 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 MED9Q9NWA0 146 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 TAAR3PQ9P1P4 343 aa14.29□□□□□ -0.12
PTPRC-206ENST00000413409 YLPM1P49750 1951 aaKnown RBP14.29□□□□□ -0.12
PTPRC-206ENST00000413409 IGLV3-9A0A075B6K5 115 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 PIGBOS1A0A0B4J2F0 54 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 DUXBA0A1W2PPF3 345 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 TMEM30CPA0ZSE6 113 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 MPTX1A8MV57 137 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 IFNL4K9M1U5 179 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 MPPED1O15442 326 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 SOD3P08294 240 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 GNRHRP30968 328 aa14.28□□□□□ -0.12
PTPRC-206ENST00000413409 CDKN1AP38936 164 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms