RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ARL15Q9NXU5 204 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 RALYQ9UKM9 306 aaKnown RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 LIPGQ9Y5X9 500 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 DENND4CQ5VZ89 1909 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 GAGE12JA6NER3 117 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 GAGE7O76087 117 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 ETHE1O95571 254 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 GAGE12FP0CL80 117 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 GAGE12GP0CL81 117 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 GAGE12IP0CL82 117 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 SRP14P37108 136 aaKnown RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 MDH2P40926 338 aaKnown RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 KIR2DS4P43632 304 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 GAGE4Q13068 117 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 POU2AF1Q16633 256 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 OOSP2Q86WS3 158 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 LSRQ86X29 649 aaPredicted RBP4.48□□□□□ -1.69
HERC4-205ENST00000412272 CDC20BQ86Y33 519 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 TTC9CQ8N5M4 171 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 OR2I1PQ8NGU4 316 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 C8orf46Q8TAG6 207 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 DOK4Q8TEW6 326 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 OXGR1Q96P68 337 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 DKK4Q9UBT3 224 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 PXMP4Q9Y6I8 212 aa4.48□□□□□ -1.69
HERC4-205ENST00000412272 NUP214P35658 2090 aaPredicted RBP4.47□□□□□ -1.69
HERC4-205ENST00000412272 MED19A0JLT2 244 aaPredicted RBP4.47□□□□□ -1.69
HERC4-205ENST00000412272 C7orf71A4D174 169 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 J3QLW9 94 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 B3GALT2O43825 422 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 CYB5AP00167 134 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 MT-ATP8P03928 68 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 CRYGBP07316 175 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 HIST1H1EP10412 219 aaKnown RBP4.47□□□□□ -1.69
HERC4-205ENST00000412272 P2RY1P47900 373 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 Q499Y3 187 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 TMEM64Q6YI46 380 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 RNF128Q8TEB7 428 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 SKA2Q8WVK7 121 aaPredicted RBP4.47□□□□□ -1.69
HERC4-205ENST00000412272 AGMATQ9BSE5 352 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 CST11Q9H112 138 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 UBTD1Q9HAC8 227 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 SH2D2AQ9NP31 389 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 KLRF1Q9NZS2 232 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 TAAR2Q9P1P5 351 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 KLHL13Q9P2N7 655 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 TRAV1-1A0A0B4J248 108 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 A0A1B0GV50 99 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 LRP5LA4QPB2 252 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 C9orf118A6NHY6 69 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 PLPP3O14495 311 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 SERF1AO75920 110 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 SLC25A14O95258 325 aaPredicted RBP4.47□□□□□ -1.69
HERC4-205ENST00000412272 SLC2A10O95528 541 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 IGLV3-27P01718 113 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 IGHG3P01860 377 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 HRH1P35367 487 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 RHOBP62745 196 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 CATR1Q13166 79 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 PDCD1Q15116 288 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 MSMO1Q15800 293 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 ACSF3Q4G176 576 aaPredicted RBP4.47□□□□□ -1.69
HERC4-205ENST00000412272 ALG10Q5BKT4 473 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 RNASEKQ6P5S7 137 aaKnown RBP4.47□□□□□ -1.69
HERC4-205ENST00000412272 C16orf82Q7Z2V1 217 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 HOGA1Q86XE5 327 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 ZADH2Q8N4Q0 377 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 KCNE3Q9Y6H6 103 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 CASP8AP2Q9UKL3 1982 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 KBTBD11-OT1A0A1B0GTJ5 212 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 DCDC2BA2VCK2 349 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 SYNGR3O43761 229 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 DEDDO75618 318 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 EDNRAP25101 427 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 KRTDAPP60985 99 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 DIAPH2-AS1Q14236 149 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 TMEM150AQ86TG1 271 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 FAM174AQ8TBP5 190 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 Q8TCH9 128 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 RNF138Q8WVD3 245 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 TMEM30AQ9NV96 361 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 COL4A3Q01955 1670 aa4.47□□□□□ -1.69
HERC4-205ENST00000412272 TRIP12Q14669 1992 aaPredicted RBP4.47□□□□□ -1.69
HERC4-205ENST00000412272 RS1O15537 224 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 RPL7P18124 248 aaKnown RBP4.46□□□□□ -1.69
HERC4-205ENST00000412272 USF1P22415 310 aaPredicted RBP4.46□□□□□ -1.69
HERC4-205ENST00000412272 GRB2P62993 217 aaKnown RBP4.46□□□□□ -1.69
HERC4-205ENST00000412272 GUCA2AQ02747 115 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 PSG7Q13046 419 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 RPTNQ6XPR3 784 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 SMIM5Q71RC9 77 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 DTWD2Q8NBA8 298 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 ZNF114Q8NC26 417 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 OR2K2Q8NGT1 345 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 WNT10AQ9GZT5 417 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 PLEKHF2Q9H8W4 249 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 ZDHHC11Q9H8X9 412 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 CYSLTR1Q9Y271 337 aa4.46□□□□□ -1.69
HERC4-205ENST00000412272 TMEM212A6NML5 194 aa4.46□□□□□ -1.7
HERC4-205ENST00000412272 FAM90A27PA6NNH2 459 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms