RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-204ENST00000412061 TMEM75Q8N9X5 138 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 LINC01555Q8NAE3 123 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 OR2M3Q8NG83 312 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 OR2K2Q8NGT1 345 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 OR5H2Q8NGV7 314 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 ANKRD36BP1Q96IX9 119 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 SLC35G5Q96KT7 338 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 OR7D2Q96RA2 312 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 KIFC1Q9BW19 673 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 PCBD2Q9H0N5 130 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 IFI27L2Q9H2X8 130 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 RPP21Q9H633 154 aaKnown RBP3.08□□□□□ -1.92
BRCA1-204ENST00000412061 NMNAT1Q9HAN9 279 aaPredicted RBP3.08□□□□□ -1.92
BRCA1-204ENST00000412061 HES4Q9HCC6 221 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 ENY2Q9NPA8 101 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 TNFRSF19Q9NS68 423 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 ARMC1Q9NVT9 282 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 TAC3Q9UHF0 121 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 LINC00527Q9UJ94 153 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 NEU3Q9UQ49 428 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 PKIGQ9Y2B9 76 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 CARHSP1Q9Y2V2 147 aaKnown RBP3.08□□□□□ -1.92
BRCA1-204ENST00000412061 SMAD5-AS1Q9Y6J3 95 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 KIF15Q9NS87 1388 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 NACADO15069 1562 aa3.08□□□□□ -1.92
BRCA1-204ENST00000412061 TP53BP1Q12888 1972 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ATRNO75882 1429 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 IGHV7-4-1A0A0J9YVY3 117 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 IGHV3-64DA0A0J9YX35 117 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 A0A1W2PP18 115 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 C15orf65H3BRN8 121 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 RGS5O15539 181 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 MAS1P04201 325 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 OR56A5P0C7T3 313 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ESDP10768 282 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 CTSEP14091 401 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 KCNE1P15382 129 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 CBR1P16152 277 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ORM2P19652 201 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 S100A2P29034 98 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 OR1E2P47887 323 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 GZMMP51124 257 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 CRYBA4P53673 196 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 GNB2P62879 340 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 FABP5Q01469 135 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ATP5G2Q06055 141 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 PMAIP1Q13794 54 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ARHGAP11BQ3KRB8 267 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 FAM78BQ5VT40 261 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ALKAL1Q6UXT8 129 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 TCF23Q7RTU1 214 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ZBTB8OSQ8IWT0 167 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ZNF567Q8N184 647 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 SLC35F6Q8N357 371 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 C15orf56Q8N910 161 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 OR9I1Q8NGQ6 314 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 OR5W2Q8NH69 310 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 JOSD2Q8TAC2 188 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 PYDC1Q8WXC3 89 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 APOBEC3DQ96AK3 386 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-204ENST00000412061 CPNE2Q96FN4 548 aaPredicted RBP3.07□□□□□ -1.92
BRCA1-204ENST00000412061 PDXPQ96GD0 296 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ACY3Q96HD9 319 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 SFRP2Q96HF1 295 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 EIF5A2Q9GZV4 153 aaKnown RBP3.07□□□□□ -1.92
BRCA1-204ENST00000412061 GRIN2BQ13224 1484 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 ARHGAP23Q9P227 1491 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 LOXHD1Q8IVV2 1947 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 MYO5BQ9ULV0 1848 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 NPATQ14207 1427 aa3.07□□□□□ -1.92
BRCA1-204ENST00000412061 IGLV3-10A0A075B6K4 115 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 PQLC2LA1A4F0 135 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 NKX2-6A6NCS4 301 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 OR6C6A6NF89 314 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 FAM159BA6NKW6 160 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 B4DEV8 164 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 F5H5P2 479 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 BPY2O14599 106 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 IGLV3-25P01717 112 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 ZNF806P0C7X5 589 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 GTF2F2P13984 249 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 CTLA4P16410 223 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 INPP1P49441 399 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 PSMB3P49720 205 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 ZNF83P51522 516 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 CMC4P56277 68 aaPredicted RBP3.06□□□□□ -1.92
BRCA1-204ENST00000412061 TAS2R41P59536 307 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 GABARAPL2P60520 117 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 ESRRGP62508 458 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 HIST1H3AP68431 136 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 H3F3AP84243 136 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 RUNX1Q01196 453 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 TEX30Q5JUR7 227 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 YIPF7Q8N8F6 280 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 OR2T4Q8NH00 348 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 RASSF5Q8WWW0 418 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 IMMP1LQ96LU5 166 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 PPP1R2P1Q96PQ5 205 aa3.06□□□□□ -1.92
BRCA1-204ENST00000412061 C19orf12Q9NSK7 152 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms