RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 PDCD6O75340 191 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 SC5DO75845 299 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 ZNF134P52741 427 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 ZNF137PP52743 207 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 KRTAP10-11P60412 298 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 GABPB1Q06547 395 aaPredicted RBP17.58■□□□□ 0.4
MSH6-202ENST00000411819 INSL4Q14641 139 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 SIGIRRQ6IA17 410 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 TEX38Q6PEX7 206 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 LYPD6Q86Y78 171 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 GAPTQ8N292 157 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 FBLIM1Q8WUP2 373 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 RBMXL1Q96E39 390 aaKnown RBP17.58■□□□□ 0.4
MSH6-202ENST00000411819 S1PR3Q99500 378 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 CST11Q9H112 138 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 OR2S2Q9NQN1 319 aa17.58■□□□□ 0.4
MSH6-202ENST00000411819 RRP9O43818 475 aaKnown RBP17.57■□□□□ 0.4
MSH6-202ENST00000411819 GLAP06280 429 aa17.57■□□□□ 0.4
MSH6-202ENST00000411819 SLC6A1P30531 599 aa17.57■□□□□ 0.4
MSH6-202ENST00000411819 GNMTQ14749 295 aa17.57■□□□□ 0.4
MSH6-202ENST00000411819 RBM48Q5RL73 367 aaKnown RBP17.57■□□□□ 0.4
MSH6-202ENST00000411819 ZNF695Q8IW36 515 aa17.57■□□□□ 0.4
MSH6-202ENST00000411819 MND1Q9BWT6 205 aa17.57■□□□□ 0.4
MSH6-202ENST00000411819 GON7Q9BXV9 100 aa17.57■□□□□ 0.4
MSH6-202ENST00000411819 GHRLQ9UBU3 117 aa17.57■□□□□ 0.4
MSH6-202ENST00000411819 CASQ2O14958 399 aaPredicted RBP17.56■□□□□ 0.4
MSH6-202ENST00000411819 MYCNOSP40205 109 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 RAB25P57735 213 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 PNLIPRP3Q17RR3 467 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 ACSM3Q53FZ2 586 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 DEFB121Q5J5C9 76 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 FAM27D1Q5T7N8 215 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 OR8H1Q8NGG4 311 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 OR52L2PQ8NGH6 319 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 DUX3Q96PT4 197 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 ABHD14AQ9BUJ0 271 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 MCRIP2Q9BUT9 160 aaKnown RBP17.56■□□□□ 0.4
MSH6-202ENST00000411819 TMED9Q9BVK6 235 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 FKBP14Q9NWM8 211 aa17.56■□□□□ 0.4
MSH6-202ENST00000411819 WI2-2373I1.2A0A1W2PRP0 233 aa17.55■□□□□ 0.4
MSH6-202ENST00000411819 RPLP1P05386 114 aaKnown RBP17.55■□□□□ 0.4
MSH6-202ENST00000411819 PPP1CCP36873 323 aaKnown RBP17.55■□□□□ 0.4
MSH6-202ENST00000411819 LSAMPQ13449 338 aa17.55■□□□□ 0.4
MSH6-202ENST00000411819 CXorf66Q5JRM2 361 aaPredicted RBP17.55■□□□□ 0.4
MSH6-202ENST00000411819 LCNL1Q6ZST4 164 aa17.55■□□□□ 0.4
MSH6-202ENST00000411819 MRPL30Q8TCC3 161 aaKnown RBP17.55■□□□□ 0.4
MSH6-202ENST00000411819 NEDD4LQ96PU5 975 aa17.55■□□□□ 0.4
MSH6-202ENST00000411819 HSPB9Q9BQS6 159 aa17.55■□□□□ 0.4
MSH6-202ENST00000411819 PLSCR3Q9NRY6 295 aa17.55■□□□□ 0.4
MSH6-202ENST00000411819 MBNL3Q9NUK0 354 aaKnown RBP17.55■□□□□ 0.4
MSH6-202ENST00000411819 JPT1Q9UK76 154 aa17.55■□□□□ 0.4
MSH6-202ENST00000411819 LANCL1O43813 399 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 CDK1P06493 297 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 UBBP0CG47 229 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 SLC2A2P11168 524 aaPredicted RBP17.54■□□□□ 0.4
MSH6-202ENST00000411819 VDAC1P21796 283 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 MYF6P23409 242 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 SOX6P35712 828 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 F2RL1P55085 397 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 EGFEM1PQ0D2K5 195 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 MMDQ15546 238 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 MORN2Q502X0 79 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 GLT8D1Q68CQ7 371 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 OR10K2Q6IF99 312 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 C5orf24Q7Z6I8 188 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 FAM71E2Q8N5Q1 922 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 MS4A15Q8N5U1 240 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 P2RX4Q99571 388 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 TMEM59Q9BXS4 323 aa17.54■□□□□ 0.4
MSH6-202ENST00000411819 PTGES3LE9PB15 166 aa17.53■□□□□ 0.4
MSH6-202ENST00000411819 STEAP3Q658P3 488 aa17.53■□□□□ 0.4
MSH6-202ENST00000411819 ZNF554Q86TJ5 538 aa17.53■□□□□ 0.4
MSH6-202ENST00000411819 RAX2Q96IS3 184 aa17.53■□□□□ 0.4
MSH6-202ENST00000411819 ANKRD65E5RJM6 399 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 H0YHG0 523 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 VSIG8P0DPA2 414 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 CHATP28329 748 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 FOXE3Q13461 319 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 MED22Q15528 200 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 DEFB136Q30KP8 78 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 GALMQ96C23 342 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 SULT4A1Q9BR01 284 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 MRPL20Q9BYC9 149 aaKnown RBP17.52■□□□□ 0.4
MSH6-202ENST00000411819 KCNK15Q9H427 330 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 DCLRE1BQ9H816 532 aa17.52■□□□□ 0.4
MSH6-202ENST00000411819 ZNF107Q9UII5 783 aaPredicted RBP17.52■□□□□ 0.4
MSH6-202ENST00000411819 CCL24O00175 119 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 RGS11O94810 467 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 ELANEP08246 267 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 GP2P55259 537 aaKnown RBP17.51■□□□□ 0.39
MSH6-202ENST00000411819 RPS27AP62979 156 aaKnown RBP17.51■□□□□ 0.39
MSH6-202ENST00000411819 HTD2P86397 168 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 SPHARQ15513 63 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 HSD17B12Q53GQ0 312 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 C6orf141Q5SZD1 244 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 UNQ9370/PRO34162Q6UXP9 181 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 C6orf201Q7Z4U5 140 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 LRRTM1Q86UE6 522 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 OR8U1Q8NH10 309 aa17.51■□□□□ 0.39
MSH6-202ENST00000411819 PHYHIPQ92561 330 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms