RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 RGP1Q92546 391 aaPredicted RBP12.97□□□□□ -0.33
MRPL55-220ENST00000411464 OR51J1Q9H342 316 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 GHITMQ9H3K2 345 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 PARP11Q9NR21 331 aa12.97□□□□□ -0.33
MRPL55-220ENST00000411464 TRAV41A0A0B4J266 112 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 ATP6V0E1O15342 81 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 HBZP02008 142 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 SPNP16150 400 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 GABRB1P18505 474 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 ALDH3A2P51648 485 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 ACTBP60709 375 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 CCDC58Q4VC31 144 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 RPL22L1Q6P5R6 122 aaKnown RBP12.96□□□□□ -0.33
MRPL55-220ENST00000411464 OR52I1Q8NGK6 324 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 OR4K15Q8NH41 348 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 OR1L1Q8NH94 360 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 DLX4Q92988 240 aaPredicted RBP12.96□□□□□ -0.33
MRPL55-220ENST00000411464 ZNF251Q9BRH9 671 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 OR2S2Q9NQN1 319 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 ETAA1Q9NY74 926 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 ERGIC3Q9Y282 383 aa12.96□□□□□ -0.33
MRPL55-220ENST00000411464 LCE6AA0A183 80 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 A0A1W2PP11 408 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 FAM90A10PA6NDY2 464 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 HLA-DRB1P01911 266 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 GP9P14770 177 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 RIPK1Q13546 671 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 LIN54Q6MZP7 749 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 TRAT1Q6PIZ9 186 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 RHOXF1Q8NHV9 184 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 ZNF184Q99676 751 aaPredicted RBP12.95□□□□□ -0.34
MRPL55-220ENST00000411464 ANKRD60Q9BZ19 345 aa12.95□□□□□ -0.34
MRPL55-220ENST00000411464 RPL36Q9Y3U8 105 aaKnown RBP12.95□□□□□ -0.34
MRPL55-220ENST00000411464 IGHV7-81A0A0B4J1V7 117 aa12.94□□□□□ -0.34
MRPL55-220ENST00000411464 MORN2Q502X0 79 aa12.94□□□□□ -0.34
MRPL55-220ENST00000411464 RAB12Q6IQ22 244 aa12.94□□□□□ -0.34
MRPL55-220ENST00000411464 MINDY2Q8NBR6 621 aa12.94□□□□□ -0.34
MRPL55-220ENST00000411464 OR6Q1Q8NGQ2 317 aa12.94□□□□□ -0.34
MRPL55-220ENST00000411464 PYDC1Q8WXC3 89 aa12.94□□□□□ -0.34
MRPL55-220ENST00000411464 RITA1Q96K30 269 aa12.94□□□□□ -0.34
MRPL55-220ENST00000411464 CITED4Q96RK1 184 aa12.94□□□□□ -0.34
MRPL55-220ENST00000411464 ALX4Q9H161 411 aaPredicted RBP12.94□□□□□ -0.34
MRPL55-220ENST00000411464 MRPS18AQ9NVS2 196 aaKnown RBP12.94□□□□□ -0.34
MRPL55-220ENST00000411464 GAR1Q9NY12 217 aaKnown RBP12.94□□□□□ -0.34
MRPL55-220ENST00000411464 RCC2Q9P258 522 aaKnown RBP12.94□□□□□ -0.34
MRPL55-220ENST00000411464 LINC01619G3V211 115 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 NBR2O15453 112 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 CA11O75493 328 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 LIMS3P0CW19 117 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 LIMS4P0CW20 117 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 RCC1P18754 421 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-220ENST00000411464 CNTFRP26992 372 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 BLVRBP30043 206 aaPredicted RBP12.93□□□□□ -0.34
MRPL55-220ENST00000411464 SLURP1P55000 103 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 C5orf64Q2M2E5 130 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 XAF1Q6GPH4 301 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 TMPRSS11AQ6ZMR5 421 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 CBR4Q8N4T8 237 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 MRPS24Q96EL2 167 aaKnown RBP12.93□□□□□ -0.34
MRPL55-220ENST00000411464 TAF9BQ9HBM6 251 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 KCNIP1Q9NZI2 227 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 KIAA1456Q9P272 454 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 CKLFQ9UBR5 152 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 MRPS28Q9Y2Q9 187 aaKnown RBP12.93□□□□□ -0.34
MRPL55-220ENST00000411464 PEX16Q9Y5Y5 336 aa12.93□□□□□ -0.34
MRPL55-220ENST00000411464 TRIM64CA6NLI5 447 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 ADARB1P78563 741 aaKnown RBP12.92□□□□□ -0.34
MRPL55-220ENST00000411464 ZFAND6Q6FIF0 208 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 ACSM6Q6P461 480 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 ARPC1AQ92747 370 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 ORAI1Q96D31 301 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 OR4C12Q96R67 309 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 NABP2Q9BQ15 211 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 ABHD14AQ9BUJ0 271 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 MRPL20Q9BYC9 149 aaKnown RBP12.92□□□□□ -0.34
MRPL55-220ENST00000411464 TOLLIPQ9H0E2 274 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 CST11Q9H112 138 aa12.92□□□□□ -0.34
MRPL55-220ENST00000411464 A0A1W2PN81 502 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 H3BNX3 289 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 OR8U9P0C7N5 309 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 CHRNA7P36544 502 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 SRSF7Q16629 238 aaKnown RBP eCLIP12.91□□□□□ -0.34
MRPL55-220ENST00000411464 ECSCRQ19T08 205 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 ZFP1Q6P2D0 407 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 GLIPR1L1Q6UWM5 242 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 C10orf67Q8IYJ2 551 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 GAPTQ8N292 157 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 JAGN1Q8N5M9 183 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 NPBQ8NG41 125 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 OR52L2PQ8NGH6 319 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 MUL1Q969V5 352 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 S100A14Q9HCY8 104 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 JPT1Q9UK76 154 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 FOXA2Q9Y261 457 aaPredicted RBP12.91□□□□□ -0.34
MRPL55-220ENST00000411464 RYR2Q92736 4967 aa12.91□□□□□ -0.34
MRPL55-220ENST00000411464 MAGEA13PA6NCF6 341 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 LDLRAD4O15165 306 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 RGS11O94810 467 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 GLAP06280 429 aa12.9□□□□□ -0.34
MRPL55-220ENST00000411464 LGALS1P09382 135 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms