RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 SLC35F2Q8IXU6 374 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 STX19Q8N4C7 294 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TCEANCQ8N8B7 351 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 POC5Q8NA72 575 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 SUMF2Q8NBJ7 301 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF439Q8NDP4 499 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PXT1Q8NFP0 134 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR10V1Q8NGI7 309 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR13C9Q8NGT0 318 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 CT45A3Q8NHU0 189 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 UBALD1Q8TB05 177 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PLPPR1Q8TBJ4 325 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 NEK7Q8TDX7 302 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 DYNLRB2Q8TF09 96 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TSEN15Q8WW01 171 aaKnown RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 SNAPC3Q92966 411 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 FGGYQ96C11 551 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 RNF183Q96D59 192 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 CMTM5Q96DZ9 223 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 CPNE2Q96FN4 548 aaPredicted RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 USMG5Q96IX5 58 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 RITA1Q96K30 269 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TMEM68Q96MH6 324 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 RDH12Q96NR8 316 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 RNF5Q99942 180 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 FAM103A1Q9BTL3 118 aaKnown RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 DPCDQ9BVM2 203 aaPredicted RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 KRTAP4-5Q9BYR2 181 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PRRG3Q9BZD7 231 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 MFFQ9GZY8 342 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 WFDC10AQ9H1F0 79 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 FBXL15Q9H469 300 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 MAGIXQ9H6Y5 334 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF556Q9HAH1 456 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR2S2Q9NQN1 319 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 FGFR1OP2Q9NVK5 253 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 CLN6Q9NWW5 311 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TVP23BQ9NYZ1 205 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TECRQ9NZ01 308 aaKnown RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 GNG12Q9UBI6 72 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PEF1Q9UBV8 284 aaKnown RBP1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TRAPPC2LQ9UL33 140 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 TP53TG1Q9Y2A0 90 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 MYRFQ9Y2G1 1151 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 CSMD3Q7Z407 3707 aa1.78□□□□□ -2.12
RNU4-53P-201ENST00000410828 PKHD1P08F94 4074 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 A0A1W2PQL4 384 aaPredicted RBP1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 MSGN1A6NI15 193 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 PRSS29PA6NIE9 313 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 H7C2Y5 167 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 FCN1O00602 326 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 UBE2CO00762 179 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 GNGT2O14610 69 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 SLC22A1O15245 554 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 XRCC3O43542 346 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 PRKYO43930 277 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 YPEL1O60688 119 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 RBBP9O75884 186 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 HTR3BO95264 441 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 FADS2O95864 444 aaKnown RBP1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 FAM107AO95990 144 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 CA2P00918 260 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 CST1P01037 141 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 MT-ND4P03905 459 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 ISG15P05161 165 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 GSTP1P09211 210 aaKnown RBP1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 OR2T7P0C7T2 308 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 ATP6V1B2P21281 511 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 PRDX6P30041 224 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 MC5RP33032 325 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 ATP6V1E1P36543 226 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 KIR2DS2P43631 304 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 MAP2K4P45985 399 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 LGALS7P47929 136 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 ALDH3A2P51648 485 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 CRISP1P54107 249 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 APOC4P55056 127 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 RPS16P62249 146 aaKnown RBP1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 DYRK1AQ13627 763 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 FXYD3Q14802 87 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 RSU1Q15404 277 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 RBMS2Q15434 407 aaKnown RBP1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 ZSCAN26Q16670 478 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 MPV17LQ2QL34 196 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 DEFB135Q30KP9 77 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 DEFB114Q30KQ6 69 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 PIGYQ3MUY2 71 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 SPATS1Q496A3 300 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 MORN2Q502X0 79 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 FAM98BQ52LJ0 330 aaKnown RBP1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 NHLRC3Q5JS37 347 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 FAM209BQ5JX69 171 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 C6orf141Q5SZD1 244 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 ATAD3CQ5T2N8 411 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 C6orf183Q5T699 404 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 SYT6Q5T7P8 510 aaPredicted RBP1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 ZNF691Q5VV52 312 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 NXNL2Q5VZ03 156 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 TMEM236Q5W0B7 351 aa1.77□□□□□ -2.13
RNU4-53P-201ENST00000410828 CGB2Q6NT52 195 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms