RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 CXCL1P09341 107 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 FBP1P09467 338 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 MAGEA5P43359 124 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 ERVFRD-1P60508 538 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 ERVK11-1P61568 191 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 ZXDAP98168 799 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 CLN3Q13286 438 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 MBNL3Q9NUK0 354 aaKnown RBP14.15□□□□□ -0.14
LIMS2-208ENST00000410011 PSENENQ9NZ42 101 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 WIPI2Q9Y4P8 454 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 MMP24Q9Y5R2 645 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 FREM1Q5H8C1 2179 aa14.15□□□□□ -0.14
LIMS2-208ENST00000410011 WDR87Q6ZQQ6 2873 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 LILRA1O75019 489 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 NDUFS6O75380 124 aaKnown RBP14.14□□□□□ -0.15
LIMS2-208ENST00000410011 NXPH3O95157 252 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 IGKV1-5P01602 117 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 OR1C1Q15619 314 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 ZNF585BQ52M93 769 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 TMEM251Q8N6I4 163 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 DOK5Q9P104 306 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 ZNF883P0CG24 379 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 NUFIP2Q7Z417 695 aaKnown RBP14.14□□□□□ -0.15
LIMS2-208ENST00000410011 OR1K1Q8NGR3 316 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 RNASE11Q8TAA1 199 aaKnown RBP14.14□□□□□ -0.15
LIMS2-208ENST00000410011 NANOS1Q8WY41 292 aaKnown RBP14.14□□□□□ -0.15
LIMS2-208ENST00000410011 GGACTQ9BVM4 153 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 OR1A1Q9P1Q5 309 aa14.14□□□□□ -0.15
LIMS2-208ENST00000410011 C21orf140B9A014 251 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 RHBDL1O75783 438 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 CEBPGP53567 150 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 TMEM267Q0VDI3 215 aaPredicted RBP14.13□□□□□ -0.15
LIMS2-208ENST00000410011 NCMAPQ5T1S8 102 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 ZNF787Q6DD87 383 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 CENPVQ7Z7K6 275 aaPredicted RBP14.13□□□□□ -0.15
LIMS2-208ENST00000410011 MRGPRGQ86SM5 289 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 C17orf78Q8N4C9 275 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 BCL2L2Q92843 193 aaPredicted RBP14.13□□□□□ -0.15
LIMS2-208ENST00000410011 RTL8AQ9BWD3 113 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 GNG13Q9P2W3 67 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 POLDIP2Q9Y2S7 368 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 TIMM9Q9Y5J7 89 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 H3BP45 60 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 ARL16Q0P5N6 197 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 ZNF146Q15072 292 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 MCEMP1Q8IX19 187 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 ZBTB34Q8NCN2 500 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 CA5BP1Q8WTZ4 195 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 RSG1Q9BU20 258 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 WDR61Q9GZS3 305 aaKnown RBP14.13□□□□□ -0.15
LIMS2-208ENST00000410011 TMEM9BQ9NQ34 198 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 OR14J1Q9UGF5 321 aa14.13□□□□□ -0.15
LIMS2-208ENST00000410011 RNF212BA8MTL3 300 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 SEC14L6B5MCN3 397 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 SLC33A1O00400 549 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-208ENST00000410011 ZNHIT1O43257 154 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 IL18BPO95998 194 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 CYB5R3P00387 301 aaPredicted RBP14.12□□□□□ -0.15
LIMS2-208ENST00000410011 CA6P23280 308 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 ZNF726P1Q15940 193 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 ZNF674Q2M3X9 581 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 TMEM41BQ5BJD5 291 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 ZNF343Q6P1L6 599 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 HAPLN4Q86UW8 402 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 IL1F10Q8WWZ1 152 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 HES7Q9BYE0 225 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 VAX2Q9UIW0 290 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 DMRT1Q9Y5R6 373 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 CFAP54Q96N23 3096 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 IFITM10A6NMD0 228 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 FAM166BA8MTA8 275 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 C9orf172C9J069 976 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 CLDN34H7C241 214 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 OR2H2O95918 312 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 OR2T2Q6IF00 324 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 RCC1LQ96I51 464 aaKnown RBP14.12□□□□□ -0.15
LIMS2-208ENST00000410011 CTDSP1Q9GZU7 261 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 SDF2L1Q9HCN8 221 aa14.12□□□□□ -0.15
LIMS2-208ENST00000410011 GAR1Q9NY12 217 aaKnown RBP14.12□□□□□ -0.15
LIMS2-208ENST00000410011 ELOA3CA0A087WX78 387 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-208ENST00000410011 ARGFXA6NJG6 315 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST1H2BKO60814 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST1H2BJP06899 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 METTL15P1P0C7V9 234 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST1H2BOP23527 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST1H2BBP33778 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST1H2BDP58876 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 RAB11AP62491 216 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST1H2BCP62807 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST2H2BEQ16778 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-208ENST00000410011 DCAF10Q5QP82 559 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 FBXW9Q5XUX1 488 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 P4HA3Q7Z4N8 544 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 EDARADDQ8WWZ3 215 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST1H2BHQ93079 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST1H2BNQ99877 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 HIST1H2BMQ99879 126 aa14.11□□□□□ -0.15
LIMS2-208ENST00000410011 TRAPPC2LQ9UL33 140 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms