RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 GID4Q8IVV7 300 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 C15orf40Q8WUR7 153 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 ORAOV1Q8WV07 137 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 AP3S1Q92572 193 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 SLC35E1Q96K37 410 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 RNF157Q96PX1 679 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 OR2A7Q96R45 310 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 PRSS27Q9BQR3 290 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 HDHD3Q9BSH5 251 aaPredicted RBP3.44□□□□□ -1.86
LSM5-206ENST00000409987 TIPINQ9BVW5 301 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 EBPLQ9BY08 206 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 PLEKHF2Q9H8W4 249 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 XPNPEP1Q9NQW7 623 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 PIEZO1Q92508 2521 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 CEP290O15078 2479 aa3.44□□□□□ -1.86
LSM5-206ENST00000409987 ANKRD36BQ8N2N9 1353 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 BTAF1O14981 1849 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 TUBGCP6Q96RT7 1819 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 IGHV1OR15-9A0A0B4J2B8 117 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 IGHV5-51A0A0C4DH38 117 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 A0A0G2JMP0 313 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 CENPVL3A0A0U1RRI6 287 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 A0A0X1KG70 313 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 TMEM238C9JI98 176 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 PGRMC1O00264 195 aaKnown RBP3.43□□□□□ -1.86
LSM5-206ENST00000409987 GYG2O15488 501 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 SLC37A4O43826 429 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 ARL6IP5O75915 188 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 IGLV2-8P01709 118 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 FABP1P07148 127 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 MIPP30301 263 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 NUDT1P36639 197 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 HSPA13P48723 471 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 WNT4P56705 351 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 PPP1CAP62136 330 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 MEF2CQ06413 473 aaPredicted RBP3.43□□□□□ -1.86
LSM5-206ENST00000409987 C1DQ13901 141 aaKnown RBP3.43□□□□□ -1.86
LSM5-206ENST00000409987 PAFAH1B3Q15102 231 aaKnown RBP3.43□□□□□ -1.86
LSM5-206ENST00000409987 UBE2NLQ5JXB2 153 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 C1orf195Q5TG92 126 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 ZNF530Q6P9A1 599 aaPredicted RBP3.43□□□□□ -1.86
LSM5-206ENST00000409987 FAM131AQ6UXB0 335 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 UBALD2Q8IYN6 164 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 SLC25A45Q8N413 288 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 ZNF645Q8N7E2 425 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 OR1P1Q8NH06 330 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 OR10D3Q8NH80 312 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 OR1L1Q8NH94 360 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 ASB17Q8WXJ9 295 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 RDH5Q92781 318 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 TSGA10Q9BZW7 698 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 TLNRD1Q9H1K6 362 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 OR52D1Q9H346 318 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 NOX3Q9HBY0 568 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 PARVAQ9NVD7 372 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 FKBP14Q9NWM8 211 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 PAQR5Q9NXK6 330 aaPredicted RBP3.43□□□□□ -1.86
LSM5-206ENST00000409987 TAS2R5Q9NYW4 299 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 VPS29Q9UBQ0 182 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 POLR1DQ9Y2S0 133 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 LSM5Q9Y4Y9 91 aaKnown RBP3.43□□□□□ -1.86
LSM5-206ENST00000409987 V9GYQ6 96 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 PPIP5K1Q6PFW1 1433 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 CLUHO75153 1309 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 CROCCQ5TZA2 2017 aa3.43□□□□□ -1.86
LSM5-206ENST00000409987 BRCA1P38398 1863 aaKnown RBP3.42□□□□□ -1.86
LSM5-206ENST00000409987 TGIF2-C20orf24A0A0A6YYL0 155 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 TEX50A0A1B0GTY4 177 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 CLDN24A6NM45 220 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 BTNL10A8MVZ5 291 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 CA11O75493 328 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 CYB5R3P00387 301 aaPredicted RBP3.42□□□□□ -1.86
LSM5-206ENST00000409987 IL3P08700 152 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 OR4E1P0C645 316 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 GABRA1P14867 456 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 ME2P23368 584 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 ELK4P28324 431 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 CCR7P32248 378 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 MAGEA12P43365 314 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 H2BFSP57053 126 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 GLYATQ6IB77 296 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 GUSBP11Q6P575 273 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 OLIG3Q7RTU3 272 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 LRRC25Q8N386 305 aaPredicted RBP3.42□□□□□ -1.86
LSM5-206ENST00000409987 CLDN22Q8N7P3 220 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 ZIC4Q8N9L1 334 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 TMEM158Q8WZ71 300 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 EXOSC8Q96B26 276 aaKnown RBP3.42□□□□□ -1.86
LSM5-206ENST00000409987 TAMM41Q96BW9 452 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 FXYD5Q96DB9 178 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 CEP19Q96LK0 163 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 LINC01587Q99440 93 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 PRRT1Q99946 306 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 RTBDNQ9BSG5 229 aaPredicted RBP3.42□□□□□ -1.86
LSM5-206ENST00000409987 PECRQ9BY49 303 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 TBL1XR1Q9BZK7 514 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 ULBP1Q9BZM6 244 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 OR51I1Q9H343 314 aa3.42□□□□□ -1.86
LSM5-206ENST00000409987 RPP21Q9H633 154 aaKnown RBP3.42□□□□□ -1.86
LSM5-206ENST00000409987 NANOGQ9H9S0 305 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms