RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 OPN4Q9UHM6 478 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 BOLA1Q9Y3E2 137 aa4.61□□□□□ -1.67
EPHA4-202ENST00000409854 IGHV3OR15-7A0A075B7D8 119 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 OOEPA6NGQ2 149 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 CRYM-AS1A6NIL9 109 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 K7N7A8 449 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 TNFRSF13BO14836 293 aaPredicted RBP4.6□□□□□ -1.67
EPHA4-202ENST00000409854 MGST3O14880 152 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 FSTL3O95633 263 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 CYB5R3P00387 301 aaPredicted RBP4.6□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF728P0DKX0 622 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 RPP30P78346 268 aaKnown RBP4.6□□□□□ -1.67
EPHA4-202ENST00000409854 C2orf68Q2NKX9 166 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 LY6G6FQ5SQ64 297 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 TRAT1Q6PIZ9 186 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF788Q6ZQV5 615 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 NLRC3Q7RTR2 1065 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 TGIF2LYQ8IUE0 185 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 MUC15Q8N387 334 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 GAFA1Q96PS6 74 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 TMPRSS13Q9BYE2 586 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 FAM234AQ9H0X4 552 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 DNTTIP1Q9H147 329 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 DNAJB11Q9UBS4 358 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 C14orf166Q9Y224 244 aaKnown RBP4.6□□□□□ -1.67
EPHA4-202ENST00000409854 IGSF10Q6WRI0 2623 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 LRRC30A6NM36 301 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 MPTX1A8MV57 137 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 TMEM178BH3BS89 294 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 C1QL1O75973 258 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 SLC22A5O76082 557 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 TK1P04183 234 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 IRF2P14316 349 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 AKR1C4P17516 323 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 NFYAP23511 347 aaPredicted RBP4.6□□□□□ -1.67
EPHA4-202ENST00000409854 NUP62P37198 522 aaPredicted RBP4.6□□□□□ -1.67
EPHA4-202ENST00000409854 GZMKP49863 264 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 RND3P61587 244 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 IL13RA1P78552 427 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 AESQ08117 197 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 KIAA2026Q5HYC2 2103 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 LPCAT3Q6P1A2 487 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 CLEC18BQ6UXF7 455 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 SSX9Q7RTT3 188 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 LDLRAD3Q86YD5 345 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 ZCCHC24Q8N2G6 241 aaKnown RBP4.6□□□□□ -1.67
EPHA4-202ENST00000409854 PRR18Q8N4B5 295 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 OR5M8Q8NGP6 311 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 PPP1R35Q8TAP8 253 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 DYNLRB1Q9NP97 96 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 KIF25Q9UIL4 384 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 TRAPPC2LQ9UL33 140 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 MAB21L2Q9Y586 359 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 DIDO1Q9BTC0 2240 aaKnown RBP4.6□□□□□ -1.67
EPHA4-202ENST00000409854 MFSD2BA6NFX1 497 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 C12orf77C9JDV5 145 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 C19orf84I3L1E1 186 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 LGALS8O00214 317 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF205O95201 554 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 GOSR1O95249 250 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 MBP02144 154 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 HEXAP06865 529 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 WNT2P09544 360 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 PGAM2P15259 253 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 PI3P19957 117 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 CD34P28906 385 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 H2BFSP57053 126 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 CD81P60033 236 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 HERV-K104P61576 105 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 SNRPD2P62316 118 aaKnown RBP4.6□□□□□ -1.67
EPHA4-202ENST00000409854 DEFA6Q01524 100 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 CLLU1Q5K131 121 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 FAM201AQ5SY85 155 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 DTX2Q86UW9 622 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 C1orf87Q8N0U7 546 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF843Q8N446 348 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 GALNT14Q96FL9 552 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 KIRREL1Q96J84 757 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 PHB2Q99623 299 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 TXN2Q99757 166 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 TAF9BQ9HBM6 251 aa4.6□□□□□ -1.67
EPHA4-202ENST00000409854 ADGRG4Q8IZF6 3080 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 IGKV1D-13A0A0B4J2D9 117 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 C15orf65H3BRN8 121 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 GOSR2O14653 212 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 SIGLEC5O15389 551 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 CGB3P0DN86 165 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 CGB7P0DN87 165 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 IGKV1-13P0DP09 117 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 GLIPR1P48060 266 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 RAP2BP61225 183 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 FAM185AQ8N0U4 392 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 BOLLQ8N9W6 283 aaKnown RBP4.59□□□□□ -1.67
EPHA4-202ENST00000409854 OR5D13Q8NGL4 314 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 OR10J5Q8NHC4 309 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 SSX3Q99909 188 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 SAV1Q9H4B6 383 aaPredicted RBP4.59□□□□□ -1.67
EPHA4-202ENST00000409854 ZNF665Q9H7R5 613 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 SLC2A9Q9NRM0 540 aa4.59□□□□□ -1.67
EPHA4-202ENST00000409854 CBLN4Q9NTU7 201 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms