RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 LDLRAD3Q86YD5 345 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 FAHD2AQ96GK7 314 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 RSRP1Q9BUV0 290 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 PLEKHF2Q9H8W4 249 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 CCL28Q9NRJ3 127 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 SLC2A9Q9NRM0 540 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 C19orf12Q9NSK7 152 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 KCNS2Q9ULS6 477 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 SFT2D2O95562 160 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 HEXAP06865 529 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 OR8U9P0C7N5 309 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 GZMHP20718 246 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 COL8A1P27658 744 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 ERP29P30040 261 aaKnown RBP10.32□□□□□ -0.76
CHMP3-204ENST00000409727 SP6Q3SY56 376 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 TRAT1Q6PIZ9 186 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 TCF23Q7RTU1 214 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 OR2AK2Q8NG84 335 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 OR8U1Q8NH10 309 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 RTN4IP1Q8WWV3 396 aaPredicted RBP10.32□□□□□ -0.76
CHMP3-204ENST00000409727 PHB2Q99623 299 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 CCL19Q99731 98 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 CALYQ9NYX4 217 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 RNF150Q9ULK6 438 aa10.32□□□□□ -0.76
CHMP3-204ENST00000409727 CHD6Q8TD26 2715 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 FAM208BQ5VWN6 2430 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 USF3Q68DE3 2245 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 NPIPB11E5RHQ5 1161 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 CCSO14618 274 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 SLC22A5O76082 557 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 F12P00748 615 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-204ENST00000409727 EIF2B2P49770 351 aaKnown RBP10.31□□□□□ -0.76
CHMP3-204ENST00000409727 LUMP51884 338 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-204ENST00000409727 NKX2-5P52952 324 aaPredicted RBP10.31□□□□□ -0.76
CHMP3-204ENST00000409727 UCP3P55916 312 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 RPL31P62899 125 aaKnown RBP10.31□□□□□ -0.76
CHMP3-204ENST00000409727 DHODHQ02127 395 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 C17orf58Q2M2W7 97 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 SGPP2Q8IWX5 399 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 LEAP2Q969E1 77 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 TIMD4Q96H15 378 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 GNG12Q9UBI6 72 aa10.31□□□□□ -0.76
CHMP3-204ENST00000409727 CRYM-AS1A6NIL9 109 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 NDUFA2O43678 99 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 DUS4LO95620 317 aaKnown RBP10.3□□□□□ -0.76
CHMP3-204ENST00000409727 RPS2P15880 293 aaKnown RBP10.3□□□□□ -0.76
CHMP3-204ENST00000409727 ERVFRD-1P60508 538 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 ZNF273Q14593 569 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 LPCAT3Q6P1A2 487 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 FAM185AQ8N0U4 392 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 MITD1Q8WV92 249 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 RAB1CQ92928 201 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 PPP1R14BQ96C90 147 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 ZNF436Q9C0F3 470 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-204ENST00000409727 CHODLQ9H9P2 273 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 DCHS2Q6V1P9 2916 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 AKAP6Q13023 2319 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 KBTBD11-OT1A0A1B0GTJ5 212 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 hADV38S2A0JD32 116 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 FAM25EA8MYX2 175 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 J3QKU1 62 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 GPR31O00270 319 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 GOSR1O95249 250 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 IFNA2P01563 188 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 OR5AC1P0C628 307 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 ANXA3P12429 323 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 CCL3L1P16619 93 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 NFYBP25208 207 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 EFNA4P52798 201 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 MRPS11P82912 194 aaKnown RBP10.3□□□□□ -0.76
CHMP3-204ENST00000409727 CR1LQ2VPA4 569 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 ANKRD55Q3KP44 614 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 UTF1Q5T230 341 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 DCAF12L2Q5VW00 463 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 TBC1D26Q86UD7 250 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 NRGNQ92686 78 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 WDR89Q96FK6 387 aaPredicted RBP10.3□□□□□ -0.76
CHMP3-204ENST00000409727 NAA60Q9H7X0 242 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 KAAG1Q9UBP8 84 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 CLN8Q9UBY8 286 aa10.3□□□□□ -0.76
CHMP3-204ENST00000409727 UTP20O75691 2785 aaKnown RBP10.29□□□□□ -0.76
CHMP3-204ENST00000409727 ST8SIA5O15466 376 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 PHF1O43189 567 aaPredicted RBP10.29□□□□□ -0.76
CHMP3-204ENST00000409727 H2BFSP57053 126 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 HTD2P86397 168 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 ZFP69Q49AA0 526 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 PRAMEF5Q5TYX0 476 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 TMEM200BQ69YZ2 307 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 NLRC3Q7RTR2 1065 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 CMTM1Q8IZ96 169 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 ZNF525Q8N782 197 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 CCDC71LQ8N9Z2 235 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 OR2D2Q9H210 308 aa10.29□□□□□ -0.76
CHMP3-204ENST00000409727 OVOL3O00110 214 aa10.28□□□□□ -0.76
CHMP3-204ENST00000409727 MPPED1O15442 326 aa10.28□□□□□ -0.76
CHMP3-204ENST00000409727 MMP23AO75900 390 aa10.28□□□□□ -0.76
CHMP3-204ENST00000409727 CGB3P0DN86 165 aa10.28□□□□□ -0.76
CHMP3-204ENST00000409727 CGB7P0DN87 165 aa10.28□□□□□ -0.76
CHMP3-204ENST00000409727 GPR6P46095 362 aaPredicted RBP10.28□□□□□ -0.76
CHMP3-204ENST00000409727 SPICQ8N5J4 248 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms