RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 SRSF7Q16629 238 aaKnown RBP eCLIP7.34□□□□□ -1.23
SCN9A-203ENST00000409672 FBXW9Q5XUX1 488 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 SYT8Q8NBV8 401 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 RAX2Q96IS3 184 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 SPTA1P02549 2419 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 CACNA1DQ01668 2161 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 IGHV4-34P06331 123 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 STARD6P59095 220 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 CTF1Q16619 201 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 HIGD1AQ9Y241 93 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 K7N7A8 449 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 SRSF10O75494 262 aaKnown RBP7.34□□□□□ -1.23
SCN9A-203ENST00000409672 RAB32Q13637 225 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 GSX1Q9H4S2 264 aaPredicted RBP7.34□□□□□ -1.23
SCN9A-203ENST00000409672 TOMM7Q9P0U1 55 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 RNF115Q9Y4L5 304 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 TBL2Q9Y4P3 447 aaKnown RBP7.34□□□□□ -1.23
SCN9A-203ENST00000409672 A0A1B0GUH1 482 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 MAP1LC3B2A6NCE7 125 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 EPOPA6NHQ4 379 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 ISG15P05161 165 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 CCDC144NLQ6NUI1 221 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 OR2H1Q9GZK4 316 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 MAP1LC3BQ9GZQ8 125 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 TMEM74BQ9NUR3 256 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 HSF4Q9ULV5 492 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 ARAP2Q8WZ64 1704 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF735P0CB33 412 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 KCNJ3P48549 501 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 TMEM229BQ8NBD8 167 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 RAB37Q96AX2 223 aa7.34□□□□□ -1.23
SCN9A-203ENST00000409672 ZNF629Q9UEG4 869 aaPredicted RBP7.34□□□□□ -1.23
SCN9A-203ENST00000409672 NPFFO15130 113 aa7.34□□□□□ -1.24
SCN9A-203ENST00000409672 UCP2P55851 309 aa7.34□□□□□ -1.24
SCN9A-203ENST00000409672 PPP1R1AQ13522 171 aa7.34□□□□□ -1.24
SCN9A-203ENST00000409672 FAM122BQ7Z309 247 aa7.34□□□□□ -1.24
SCN9A-203ENST00000409672 FAM168AQ92567 244 aa7.34□□□□□ -1.24
SCN9A-203ENST00000409672 FBXL17Q9UF56 701 aa7.34□□□□□ -1.24
SCN9A-203ENST00000409672 PDCD6O75340 191 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 ZNF415Q09FC8 603 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 FOXJ2Q9P0K8 574 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 ANXA10Q9UJ72 324 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 CEP290O15078 2479 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 UPK3AO75631 287 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 GP2P55259 537 aaKnown RBP7.33□□□□□ -1.24
SCN9A-203ENST00000409672 PNLIPRP3Q17RR3 467 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 BEND2Q8NDZ0 799 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 OR4C13Q8NGP0 309 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 DEFB104AQ8WTQ1 72 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 ZFAND2BQ8WV99 257 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 PHYHIPQ92561 330 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 OR10C1Q96KK4 312 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 WIPI2Q9Y4P8 454 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 TRIOBPQ9H2D6 2365 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 MUC21A0A0G2JKD1 596 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 MUC21A0A140T8X8 626 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 GPX1P07203 203 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM241Q24JQ0 296 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 MUC21Q5SSG8 566 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 LOC101059948A0A1B0GTJ6 334 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 TMEM129A0AVI4 362 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 C9orf170A2RU37 121 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 SYNGR1O43759 233 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 DLX6P56179 175 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 RFLNBQ8N5W9 214 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 SYT11Q9BT88 431 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 A0A0B4J2E0 115 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 A0A1B0GX12 115 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 KLF7O75840 302 aaPredicted RBP7.33□□□□□ -1.24
SCN9A-203ENST00000409672 AMY1AP04745 511 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 SPNP16150 400 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 VSTM2AQ8TAG5 236 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 RNF122Q9H9V4 155 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 SIGLEC7Q9Y286 467 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 WNT9BO14905 357 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 CCKARP32238 428 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 RPL24P83731 157 aaKnown RBP7.33□□□□□ -1.24
SCN9A-203ENST00000409672 PNKDQ8N490 385 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 KIF13BQ9NQT8 1826 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 CEACAM18A8MTB9 384 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 ADAP1O75689 374 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 CTSSP25774 331 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 MAS1LP35410 378 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 LHX2P50458 406 aa7.33□□□□□ -1.24
SCN9A-203ENST00000409672 KIAA2026Q5HYC2 2103 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 IGHV3-11P01762 117 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 ADRB1P08588 477 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 CD24P25063 80 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 SIGIRRQ6IA17 410 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 SLC22A18ASQ8N1D0 253 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 LOC107984156A0A0G2JMH3 177 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 J3QR89 54 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 SLC25A17O43808 307 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 TEX30Q5JUR7 227 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 MRM1Q6IN84 353 aaKnown RBP7.32□□□□□ -1.24
SCN9A-203ENST00000409672 ARL17AQ8IVW1 177 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 ADAD2Q8NCV1 583 aaKnown RBP7.32□□□□□ -1.24
SCN9A-203ENST00000409672 GUK1Q16774 197 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 FAM162BQ5T6X4 162 aa7.32□□□□□ -1.24
SCN9A-203ENST00000409672 IL36RNQ9UBH0 155 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms