RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 CLEC3BP05452 202 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 HNRNPA3P51991 378 aaKnown RBP13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 RRADP55042 308 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 HIST3H3Q16695 136 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 SLC25A53Q5H9E4 307 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 Q6ZN92 141 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 TCF24Q7RTU0 167 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 OR8G5Q8NG78 346 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 KLRF1Q9NZS2 232 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 F5H5K5 113 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 ATXN7O15265 892 aaPredicted RBP13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 ZNF709Q8N972 641 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 OR2G3Q8NGZ4 309 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 C10orf35Q96D05 121 aa13.94□□□□□ -0.18
COL4A3BP-204ENST00000405807 YPEL1O60688 119 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 SCGB1A1P11684 91 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 SFTPDP35247 375 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 CSNK1A1P48729 337 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 FXYD4P59646 89 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 EWSR1Q01844 656 aaKnown RBP eCLIP13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 PHLDA2Q53GA4 152 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 MSI2Q96DH6 328 aaKnown RBP13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 YPEL2Q96QA6 119 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 AK3Q9UIJ7 227 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 FUT9Q9Y231 359 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 A0A1B0GX78 115 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 OTX1P32242 354 aaPredicted RBP13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 OPRM1P35372 400 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 CCL20P78556 96 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 MPV17LQ2QL34 196 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 PLPPR5Q32ZL2 321 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 TSPO2Q5TGU0 170 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 SHISA6Q6ZSJ9 500 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 MRPL21Q7Z2W9 205 aaKnown RBP13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 GJC3Q8NFK1 279 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 TMEM9BQ9NQ34 198 aa13.93□□□□□ -0.18
COL4A3BP-204ENST00000405807 TRAV34A0A0B4J273 112 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 A0A1W2PNR3 127 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 PSG3Q16557 428 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 BSXQ3C1V8 233 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 KIAA1456Q9P272 454 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 KIAA0100Q14667 2235 aaKnown RBP13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 B4DEV8 164 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 MSTNO14793 375 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 IGLV3-19P01714 112 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 MTCP1P56278 107 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 FOXL2P58012 376 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 RND3P61587 244 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 OR2C3Q8N628 320 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 TMEM106BQ9NUM4 274 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 HIF1ANQ9NWT6 349 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 PPP1R3CQ9UQK1 317 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 B3GALT1Q9Y5Z6 326 aa13.92□□□□□ -0.18
COL4A3BP-204ENST00000405807 G3V4G9 280 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 GLI4P10075 376 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 UCP1P25874 307 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 HLA-DRB3P79483 266 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 C17orf82Q86X59 251 aaPredicted RBP13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 FBXL14Q8N1E6 418 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 CYB561D1Q8N8Q1 229 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 ZFP62Q8NB50 900 aaPredicted RBP13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 OR1K1Q8NGR3 316 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 VN1R17PQ8TDU5 208 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 TMEM242Q9NWH2 141 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 UQCR10Q9UDW1 63 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 FAM230AA0A1W2PPH8 454 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 CDIPTO14735 213 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 PHF1O43189 567 aaPredicted RBP13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 RBFOX2O43251 390 aaKnown RBP eCLIP13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 RBMXL2O75526 392 aaKnown RBP13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 MT-CO2P00403 227 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 SRP19P09132 144 aaKnown RBP13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 ATP6V0CP27449 155 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 ASCL1P50553 236 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 TAS2R30P59541 319 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 CST9LP1Q5W188 147 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 SPSB3Q6PJ21 355 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 Q6ZSR3 168 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 CCDC71LQ8N9Z2 235 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 TMEM170AQ8WVE7 144 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 SFRP2Q96HF1 295 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 PILRBQ9UKJ0 227 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 ADAMTS9Q9P2N4 1935 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 TRANK1O15050 2925 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 ZNF891A8MT65 544 aaPredicted RBP13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 ZNF205O95201 554 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 MSR1P21757 451 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 COLCA1Q6ZS62 124 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 SARAFQ96BY9 339 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 ABI3Q9P2A4 366 aa13.91□□□□□ -0.18
COL4A3BP-204ENST00000405807 CKS1BP61024 79 aa13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 DEFB133Q30KQ1 61 aa13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 TMEM176BQ3YBM2 270 aaPredicted RBP13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 DPPA3Q6W0C5 159 aa13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 WIPI2Q9Y4P8 454 aa13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 ODAMA1E959 279 aa13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 FAM24AA6NFZ4 105 aa13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 PITX3O75364 302 aa13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 HSPB1P04792 205 aaKnown RBP13.9□□□□□ -0.18
COL4A3BP-204ENST00000405807 MLF1P58340 268 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms