RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 LOXL4Q96JB6 756 aa8.7□□□□□ -1.02
PTPRM-203ENST00000400060 FAHP16930 419 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 EN2P19622 333 aaPredicted RBP8.69□□□□□ -1.02
PTPRM-203ENST00000400060 CLDN17P56750 224 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 TTC32Q5I0X7 151 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 SELENOHQ8IZQ5 122 aaKnown RBP8.69□□□□□ -1.02
PTPRM-203ENST00000400060 STXBP6Q8NFX7 210 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 WFDC6Q9BQY6 131 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 LANCL2Q9NS86 450 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 HCFC2Q9Y5Z7 792 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A10PA6NDY2 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A18PA6NE21 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A16PA6NEW6 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A20PA6NIJ5 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A8PA6NJQ4 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A7PA6NKC0 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A22PA8MWA6 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A12PA8MX19 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A5PA8MXJ8 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A23PA8MXZ1 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A15PP0C7V4 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A13PP0C7W8 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A14PP0C7W9 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FAM90A24PP0C7X0 464 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 DRD1P21728 446 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 ADMP35318 185 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 LTC4SQ16873 150 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 PRAMEF5Q5TYX0 476 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 PRAMEF6Q5VXH4 476 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 LINC01551Q86U37 167 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 OR10G3Q8NGC4 313 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 OR10AG1Q8NH19 301 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 ASB10Q8WXI3 467 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 APOBEC3DQ96AK3 386 aaPredicted RBP8.69□□□□□ -1.02
PTPRM-203ENST00000400060 C18orf12Q96KH6 178 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 TMEM238LA0A1B0GVL6 79 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 IGSF23A1L1A6 192 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 GRIFINA4D1Z8 144 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 A6NJY4 79 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 CORTO00230 105 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 PLPP3O14495 311 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 PRR18Q8N4B5 295 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 RBMXL3Q8N7X1 1067 aaKnown RBP8.69□□□□□ -1.02
PTPRM-203ENST00000400060 SCCPDHQ8NBX0 429 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 PRSS3P2Q8NHM4 247 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 HINT2Q9BX68 163 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 PRSS38A1L453 326 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 RBFOX2O43251 390 aaKnown RBP eCLIP8.69□□□□□ -1.022e-6■■■■□ 22.1
PTPRM-203ENST00000400060 DUX1O43812 170 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 ZNF324O75467 553 aaPredicted RBP8.69□□□□□ -1.02
PTPRM-203ENST00000400060 NTN1O95631 604 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 NPY1RP25929 384 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 TSPOP30536 169 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 SRIP30626 198 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 GPR183P32249 361 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 TPTE2P1Q5T6R2 138 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 FBXW9Q5XUX1 488 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 MMD2Q8IY49 270 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 ATP6V0BQ99437 205 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 PXMP4Q9Y6I8 212 aa8.69□□□□□ -1.02
PTPRM-203ENST00000400060 PRAMEF26H0Y7S4 382 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 ASAH2BP0C7U1 165 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 IL3RAP26951 378 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 KIR2DS2P43631 304 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 TRA2AQ13595 282 aaKnown RBP eCLIP8.68□□□□□ -1.02
PTPRM-203ENST00000400060 LRRC75BQ2VPJ9 315 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 OR52M1Q8NGK5 317 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 SOX21Q9Y651 276 aaPredicted RBP8.68□□□□□ -1.02
PTPRM-203ENST00000400060 A1L4Q6 167 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 F2RP25116 425 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 WNT5AP41221 380 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 VEGFBP49765 207 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 OR8B3Q8NGG8 313 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 TMEM230Q96A57 120 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 ZNF257Q9Y2Q1 563 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 SMCHD1A6NHR9 2005 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 SCN1AP35498 2009 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 A0A1W2PQD3 144 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 NDUFB4O95168 129 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 CTLA4P16410 223 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 RPS4XP62701 263 aaKnown RBP8.68□□□□□ -1.02
PTPRM-203ENST00000400060 PRSS53Q2L4Q9 553 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 OR11L1Q8NGX0 322 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 WBP2Q969T9 261 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 CYSLTR1Q9Y271 337 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 GAGE12BA1L429 117 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 ZNF891A8MT65 544 aaPredicted RBP8.68□□□□□ -1.02
PTPRM-203ENST00000400060 BGLAPP02818 100 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 SMIM17P0DL12 118 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 OTX1P32242 354 aaPredicted RBP8.68□□□□□ -1.02
PTPRM-203ENST00000400060 PDLIM4P50479 330 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 MRPS11P82912 194 aaKnown RBP8.68□□□□□ -1.02
PTPRM-203ENST00000400060 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.68□□□□□ -1.02
PTPRM-203ENST00000400060 PLXDC1Q8IUK5 500 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 CADM4Q8NFZ8 388 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 OR2W1Q9Y3N9 320 aa8.68□□□□□ -1.02
PTPRM-203ENST00000400060 SPINT2O43291 252 aa8.67□□□□□ -1.02
PTPRM-203ENST00000400060 ZIC2O95409 532 aaPredicted RBP8.67□□□□□ -1.02
PTPRM-203ENST00000400060 CA3P07451 260 aa8.67□□□□□ -1.02
PTPRM-203ENST00000400060 FCER1GP30273 86 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms